DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a9

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_005163551.1 Gene:slc6a9 / 494490 ZFINID:ZDB-GENE-050105-3 Length:653 Species:Danio rerio


Alignment Length:711 Identity:155/711 - (21%)
Similarity:271/711 - (38%) Gaps:169/711 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SAHNITTASNAKLLPAVEDESNKQTKCSVFRG----LVLCLCLNLSYA----NVVRFPRELDRY- 245
            |..|.|.|..|....||..|..|:.:.| .||    .:..:..::.||    ||.|||....|. 
Zfish     2 SESNTTAAVMADQNGAVPGEPVKRDENS-RRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNG 65

  Fly   246 GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVSLQ 310
            |.|::.||.::|...|:|:..||:|.|||...|....|:.||:|||........|....|:.::.
Zfish    66 GGAFMFPYFIMLVFCGIPLFFLELSFGQFTSLGCLGVWKVSPMFKGVGYGMMVVSTYIGIYYNVV 130

  Fly   311 AVLALAYIGMFASNDLPFR---------ECAGPVKLRLSGYLLTGTSG-----QECLQLTFLT-- 359
            ..:|..|..|..:|.||:.         :|:|.|....:.......|.     .|.:..|..|  
Zfish   131 ICIAFYYFFMSMTNLLPWTYCNNPWNTPDCSGVVSTHRANATFANMSAVVSGVTEIVNRTKRTSP 195

  Fly   360 --PFWRNPLY--------FGLLAAGLIGL----WIVVMLC-THNAKILRRSIF---VFGLVGLVL 406
              .:|||.:.        ||.:...::|.    |.||.|| ....|...:.::   .|..|.|.:
Zfish   196 SEEYWRNYVLNISDGIGNFGEVRLPILGCLAVSWFVVFLCLIRGVKSSGKVVYFTATFPYVVLTI 260

  Fly   407 L----CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFL 467
            |    .||.|   ..|..::|....|    ..:.::.:|.:|..|:.:|:.|.:|.|..:.....
Zfish   261 LFIRGITLDG---AISGIKYYLTPQW----QKILDAKVWGDAASQIFYSLGCAWGGLITMASYNK 318

  Fly   468 YKGDAVRTSVV-------------YLCFNLLINAIAVTLFMVQFDLSSNG-------FQNMEELK 512
            :..:..|.|::             ::.|::| ..:|..|.:...:::.:|       :.....|.
Zfish   319 FHNNCFRDSIIISVTNCGTSVYAGFVIFSIL-GFMAHHLGVDVSEVADHGPGLAFVAYPEALTLL 382

  Fly   513 PLTAIYDRVLNGSREGDSHLLQHLVPSLIYALIILS------AMVSITVAVY--TSTRLVPRRPN 569
            |::.::..:                  ..:.||:|.      .:.::..||.  ..|..:.:...
Zfish   383 PISPLWSLL------------------FFFMLILLGLGTQFCLLETLVTAVVDEIGTDWIIKNKT 429

  Fly   570 YV---ICLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFS 631
            ||   :.:||.::.|............::|:......:|.......|.|.::||.||.:.|:|..
Zfish   430 YVTLGVAIIGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMCICIMYVYGHKNYFKDVEMM 494

  Fly   632 IGRP---IFRV-WMWLWVICPAILTGILVWWCADDDQYDLLA--EYL-PRWAPIL-FVLAVIVII 688
            :|.|   .||: |.:   :.|.|:|.||::...   ||..:.  :|: |.|:.:: |.:|:..:|
Zfish   495 LGFPPPIFFRICWRY---VSPFIITFILIFTVI---QYKPITYNDYVYPGWSLVIGFAMALSSVI 553

  Fly   689 ACVQIFRQVEY------NFFGMICEASKPAKEWGPADPLARHSWKQWRSVCQDTGRRDFTLRRRG 747
             |:.|:...:.      .|...:..:.||..:||||  |..|                       
Zfish   554 -CIPIYALFKIAMSEGSTFLERLKNSVKPDPDWGPA--LQEH----------------------- 592

  Fly   748 TRDYTHSIKKGQYSSATKYGVQ----------NGGQTQTPMHQQHWKSSTPGNSSPNYSGS 798
                    :||:|::|....|:          .|....|...::..|....|.:.|..:||
Zfish   593 --------RKGRYATAGPESVEVSPLKEDLKDEGKDKLTEKEKETEKKDEIGLTIPGSNGS 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 114/521 (22%)
slc6a9XP_005163551.1 SLC6sbd_GlyT1 15..598 CDD:212067 140/649 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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