DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and CG4476

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster


Alignment Length:636 Identity:145/636 - (22%)
Similarity:252/636 - (39%) Gaps:137/636 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LLP-AVE------DESNKQTKCSVFRGLVLCLCLNLSYANVVRFP-RELDRYGSAYLVPYVVLLF 258
            ||| |:|      |...:....|....|:.|:.|::...||.||| ..|:..|.|:|:||:|:||
  Fly    34 LLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLF 98

  Fly   259 LVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFA-SWLSAIWVSLQAVLALAYIGMFA 322
            :||.|:..:|:.:|||..:|....:..:|:.:|.......| ..|:..:.|:.|:....:...||
  Fly    99 VVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFA 163

  Fly   323 SNDLPFRECA-----GPVKLR----LSGYLLTGTSGQECLQLTFLTPFWRNPLYFGL-----LAA 373
            | :||:..|.     |.|...    |.|.|....|....|.|..:.....:.|..|:     ..|
  Fly   164 S-ELPWSFCREEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLA 227

  Fly   374 GLIGL-WI-VVMLCTHNAKILRRSIFVFGL-------VGLVLLCTLTG------------WEVRN 417
            .::|: |: |.::.....|...::.:|..|       :.||...||.|            ||   
  Fly   228 LMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE--- 289

  Fly   418 SFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMIT-----GKFLYKGDAVRTSV 477
                            .|.|..:|:||:.||.||:...||.:.|.:     |..:|:...:.|::
  Fly   290 ----------------KLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTL 338

  Fly   478 VYLCFNLLINAIAV--TLFMVQFDLSSNGFQNMEELKPLTAI--YDRVLNGSREGDSHLLQHLVP 538
            .  .|..|::.:.:  .|..:..:..:....::.:..|..|.  |...:     ....:...:..
  Fly   339 D--TFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAI-----AKFKMFPQVFS 396

  Fly   539 SLIYALIIL------SAMVSITVAV----YTSTRLVPRRPNYVI----CLIGLVVAVISFAAPKF 589
            .|.:|::.:      ..|||..:.|    :.:.:|      ::|    .:||.:|.:|.......
  Fly   397 LLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVKL------WIIVVSLSVIGFLVGLIYITPGGQ 455

  Fly   590 LIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTG 653
            .|..::|...|..:.:.:.:|||||:.||||.|.:..|.|:.:.......:...| ::.|.::..
  Fly   456 HIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLV 520

  Fly   654 ILVWWCADDDQYDLLA----EYLPRWAPILFVLAVIVIIACV--QIFRQVEYNFF--------GM 704
            |||        |.||.    .|..:..|:::.:....:..|:  |:|....|..|        ..
  Fly   521 ILV--------YSLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSR 577

  Fly   705 ICEASKPAKEWGPADPLARHSWKQW--------------RSVCQDTGRRDF 741
            |..:.||..:|||:||.....::.:              |.||...|.|.|
  Fly   578 INNSIKPHSDWGPSDPKKLMDYQMFLRNKDEENSKNVNRRCVCYTAGDRIF 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 114/500 (23%)
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 116/514 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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