DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a16

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001311464.1 Gene:Slc6a16 / 381884 MGIID:2685930 Length:742 Species:Mus musculus


Alignment Length:750 Identity:152/750 - (20%)
Similarity:265/750 - (35%) Gaps:224/750 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 MRRAKANETDLPTVTPSPQTTRSCISTVSSVVDSGGGRTTATSGRISSS---------GIVTLSD 161
            ||..|..|.:       |..:|:..|.|....:|....:.:...:::..         |::|.|.
Mouse     1 MRSTKEGENE-------PSKSRASPSDVPQASESNMEESVSWDSKLTDMDSHLGAWEVGMLTWSP 58

  Fly   162 SNNTLSEIQGGYHDMDHDAVSKNFSISASAHNITTASNAKLLP-----------AVEDESN---- 211
            | ..:::.|          ||:.....|.|......:...|.|           .:|.||:    
Mouse    59 S-TWIAQAQ----------VSETRMAKAQAWETLALARITLQPKPSVTELATVTTLEQESSELVN 112

  Fly   212 ------------KQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRYGS-AYLVPYVVLLFLVGLP 263
                        :|...|....::..:...|..:.|:||.......|| ::.:.|:::|..:|:|
Mouse   113 RMSRESSEGYPPRQLWASKVEYMLAIMSYLLMPSGVLRFASGWVHKGSCSFFIAYILMLLGIGIP 177

  Fly   264 MVLLEISVGQFLGQGAAHTWR-ASPIFKG-------ACMISR-----FASWLSAIWVSLQAVLAL 315
            ::.||::|||...|.:|..|: .||.|.|       .|.|:.     |.||:         :..:
Mouse   178 LLFLEMAVGQRAQQSSADMWKNLSPWFGGVGYSMVMVCFITNTYLNVFNSWI---------LFYM 233

  Fly   316 AYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSGQECLQLTFLTPFW-RNPL------------Y 367
            ::|..|.   :|:.:|  |::...|.:      ..||.|.|..|.|| |..|            .
Mouse   234 SHIFYFV---VPWDQC--PLQRNSSNF------DPECEQATSYTYFWYRKTLKASDRIEDGGQPS 287

  Fly   368 FGLLAAGLIGLWIVVMLCTHNAKILRRSIFVFGLVGL-VLLC------TLTGWEVRNSFSRHYFP 425
            |.|..:..:...::.....:..|.:.:.:||..||.. :::|      ::.|.|           
Mouse   288 FSLGMSLFLSFCLICAFLVNGIKSIGKVLFVLLLVPYSIIVCFLIRTLSMDGAE----------- 341

  Fly   426 ELWGFDSNL------LAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNL 484
              :|....|      :::..||.:|.:||||.:..|||.:..:........:.:..:.:...|.:
Mouse   342 --YGLKHLLILKVASISDLTIWCHAGIQVLFDIGLGFGPIVSLASHVPDFNNCMADAFLMALFKI 404

  Fly   485 LINAIAVTLFM-VQFDLSSNGF-----------QNMEELKPLTA-------IYDRVLNGSREGD- 529
                  :||.| ..|.||..||           :|.|.|..|.|       .....|:|:...: 
Mouse   405 ------ITLLMTTPFLLSILGFWATTTTHHCCKKNQETLLRLVAQGILPPDAQPPDLSGNPTSNY 463

  Fly   530 SHLLQHLVPSLIYAL----------------------------------------IILSAMVSIT 554
            :..|..|.|.|..|:                                        |:|..::.:|
Mouse   464 NSWLSSLPPPLRSAVLSVVPECSVQKQFLKIKDNPRFLFLIFTEVISLLPGSGFWIVLFFLLLLT 528

  Fly   555 VA-----------VYTSTRLVP---RRPNYVICLIGLVVAV--ISFAAPK-FLIARVLDSRLVGT 602
            :.           |.|.....|   |:|..:|..:.:.:.:  :.|..|. .....:|....|..
Mouse   529 LGLCSNLMFMLGNVLTLQDTFPFCRRQPRLLIVCVSMAMFLCGLIFIQPSGIYYFSLLSECWVAV 593

  Fly   603 MVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGI------------ 654
            .|:..::.|.:|:.|.|||.....|:...:|||||....||| .|.|.::.|:            
Mouse   594 PVIIIIICENLAVAWAYGADRFLADMVALLGRPIFSGCGWLWCYISPMVVLGLLTSVFVYLVKGP 658

  Fly   655 LVWWCADDDQYDLLAEYLPRWAPILFV-LAVIVII 688
            ||::..|......:....|.|:.||.. |.|.|::
Mouse   659 LVYFAWDSSTSKEVVRVFPEWSKILIAGLTVFVLM 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 119/569 (21%)
Slc6a16NP_001311464.1 SLC5-6-like_sbd 125..694 CDD:294310 129/607 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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