DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and GlyT

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster


Alignment Length:971 Identity:217/971 - (22%)
Similarity:350/971 - (36%) Gaps:280/971 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 QTTRSCISTVSSVVDSGGG---RTTATSGRISSSGIVTLSDSNNTLSEIQGGYHDMDHDAVSKNF 185
            |:::|..:.|.. |..|||   .:||.||..|.:.::.|    :......||             
  Fly     3 QSSKSGSAGVGG-VGGGGGVVCPSTAISGCASGTALIQL----DATGPGAGG------------- 49

  Fly   186 SISASAHNITTASNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRY----- 245
                               |.|.|..:.|....|..|:..|..::...||.|||     |     
  Fly    50 -------------------AGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFP-----YLCYNN 90

  Fly   246 -GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA-SPIFKGACMISRFASWLSAIWVS 308
             |.|:|:|:.::|.:.|||::.:|:|.||:...|....:|. .|:|:|........|.:..::.:
  Fly    91 GGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYN 155

  Fly   309 LQAVLALAYIGMFAS--NDLPFREC--AGPVKLRLS-------------GYLLT---GTSGQECL 353
            |  ::|.....||||  ..||::.|  |...|...|             .||.|   .||..|..
  Fly   156 L--IIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENN 218

  Fly   354 QLTFLTPFWRNP---LYF-----GL-------------LAAGLIGLWIVVMLC-----THNAKIL 392
            ..|......:.|   .||     ||             |||.|...|.:|.||     ..:.|::
  Fly   219 ITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVV 283

  Fly   393 RRSIFVFGLVGLVLL----CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVN 453
            ..:. :|..|.||:|    .||.|......|   |....|    ..||.:.:|.:|.:|:.|:::
  Fly   284 YFTA-LFPYVVLVILFVRGVTLPGASTGILF---YLTPDW----KQLANAQVWGDAAVQIFFALS 340

  Fly   454 CGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDLSSNGFQNMEELKPLTAIY 518
            ..:|.|..::....:..:..:.|::....|     ||.:.|......|..||...|    |....
  Fly   341 PAWGGLITLSSYNKFSNNCYKDSLIVAFCN-----IATSFFAGLVIFSIIGFLAHE----LNVDV 396

  Fly   519 DRVLNGSREGDS-------HLLQHLVPSLIYALIILSAMVSI------TVAVYTSTRLVPRRPN- 569
            ::|::   :|..       .::..|..|.::|::....::::      .:....:|.::.|.|| 
  Fly   397 EKVVD---QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNL 458

  Fly   570 --YVICLIGLVVAVISFAA-------PKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIY 625
              |.|.:: |.||:..:..       ......:::|.......|:...:.|.|.|.||||::...
  Fly   459 RQYKIWVV-LSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFL 522

  Fly   626 TDLEFSIGRPIFRVWMW------LW-VICPAILTGILVW-WCADDDQYDLLAEY---------LP 673
            .|::..||:   |.|.|      :| .|.||.|..||.: |          .||         .|
  Fly   523 NDIQGMIGK---RSWFWNFFWGIMWRYITPATLLFILFFNW----------VEYKPAKYGHYVYP 574

  Fly   674 RWA----------PILFVLAVIVIIACVQIFR-QVEYNFFGMICEASKPAKEWGPADPLARHSWK 727
            .||          |:|    ||.::|..:|:| .:..:|...|....:|..|||||         
  Fly   575 MWADAVGWIVGLLPVL----VIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPA--------- 626

  Fly   728 QWRSVCQDTGRRDFTLRRRGTRDYTHSIKKGQYSSATKYGVQN-GGQTQTPMHQQHWKSSTPGNS 791
                     ||....|.                  |.:|..|| .|.|.|       |......:
  Fly   627 ---------GRPCVNLH------------------AERYQSQNYDGVTNT-------KILIEEEA 657

  Fly   792 SPNYSGSMFGDSAIEEDISVD----------KFPGITQQQYVPFQASDTKQSRYSQRIRQTAQPQ 846
            ||..:.:. .|..:..|:.||          |.||..:        |..||.. |..::..|:..
  Fly   658 SPKQAANK-KDRQLTLDVDVDVECLPLATVGKRPGAPK--------SMGKQGS-SGNLQTNAKNG 712

  Fly   847 TQ----TQMRPPRESV---EKHREVVYIRRLSDGGTGTGHATRIEISPSNESITYGNG-----KS 899
            |.    |::.|.::.:   ||..:...|:.|:.|...:|...      :..|...|.|     |.
  Fly   713 THKSPTTEISPSKQPLIPSEKDNKSANIKVLAAGTQSSGREC------TTMSTFAGGGEKKSTKV 771

  Fly   900 NNNYSSAMSRNPLGRS---TGCLAAPAQPPPPSVHVKRSASSVVNVNSHKLPPPATSGGAA 957
            |....:..:..||..|   |....|.|...||:..|  :.:::|.:.:......|.:.|.|
  Fly   772 NLATGATSAAAPLASSNIATAATVAAATKSPPAAGV--APTTLVGIAATGTTVAAAANGKA 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 125/527 (24%)
GlyTNP_611836.2 SNF 57..603 CDD:249680 138/590 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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