DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and List

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:594 Identity:123/594 - (20%)
Similarity:228/594 - (38%) Gaps:160/594 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPR-ELDRYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            |..|:.|::...|:.|||. .....|..:::||::.|.::|.|:..||||:|||.|:|....:..
  Fly    28 LFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTGRGVVKAFDM 92

  Fly   286 SPIFKGACMISRFASWLSAIWVSLQAVLALA---YIGMFASNDLPFREC---------------- 331
            :|:.||..:....|:..|..:.|  :::||.   ::..|.| :||:..|                
  Fly    93 APLLKGVALGQVLATAASITYYS--SIMALTLRFWLASFGS-ELPWSRCWESWGTDCHDGNAQNS 154

  Fly   332 ---AGPVKLRL------------SGYLLTGTSGQECLQLTFLTPFWRNPLYFGLLAAGL------ 375
               ..|.:|..            :|..|.......||.:.:|       :..|:|..|:      
  Fly   155 SGKMSPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIAWL-------VIGGVLIRGIKSSGKA 212

  Fly   376 ---IGLWIVVMLCTHNAKILRRSIFVFGLV-GLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLA 436
               :|::..|:|..    :|.|::.:.|.: |::                ::|...|    ..|.
  Fly   213 AYFLGVFPYVVLLI----LLLRAVTLPGAIDGII----------------YFFKPQW----RELL 253

  Fly   437 ESNIWFNALMQVLFSVNCGFGALPMIT-------GKFLYKGDAVRT------SVVYLC--FNLLI 486
            ...:|:.|:.||.||:...||.|  ||       .:.:|....:.|      |::..|  |.:|.
  Fly   254 NPLVWYAAVTQVFFSLAICFGTL--ITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILG 316

  Fly   487 NAIAVT--------------LFMVQFDLSSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLV 537
            |....|              |..:.:..:...|:.:.::.                         
  Fly   317 NLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMF------------------------- 356

  Fly   538 PSLIYALIILSAMVSITVAVYTSTRLVPR-------RPNYVIC----LIGLVVAVISFAAPKFLI 591
             ::::.|::....:..||.:.:....|.|       .|.:.:.    ::|..|:::........|
  Fly   357 -AVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIWKLASGLTVLGFSVSIVYMTPGGQFI 420

  Fly   592 ARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMW--LW-VICPAILTG 653
            ..::|...|....:...:.||:|:.||||......|::|.:|  |...|.|  .| .|.|.::|.
  Fly   421 LNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFMMG--IETGWYWRLCWRFITPGLMTA 483

  Fly   654 ILVWWCADDDQYDLLAEYLPRWAPIL-FVLAVIVII-----ACVQIFRQVEYN--FFGMICEASK 710
            :|::...|....:......|..|.:. ..||.:.:|     |...|:::..:|  |:..|..|.|
  Fly   484 VLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACK 548

  Fly   711 PAKEWGPAD 719
            |:..||||:
  Fly   549 PSDTWGPAN 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 105/524 (20%)
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 105/524 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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