DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and CG43066

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster


Alignment Length:632 Identity:146/632 - (23%)
Similarity:233/632 - (36%) Gaps:185/632 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 HNIT---TASNAKLLPAVEDESNKQTKCSVFRGLVLCLCL---NLSYANVVRFPRELDRY-GSAY 249
            |.:|   ||.....:.:|:...|:..:.:....:...|.:   ::...|:.|||....:. |.|:
  Fly    29 HGVTIVLTAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAF 93

  Fly   250 LVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVSLQAVLA 314
            |:|::|:|.|.|:|:.|:|:.:||.:..||...|.....:.|...||   |.:..::|:|...:.
  Fly    94 LIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGIS---SCIVTLFVALYYNVI 155

  Fly   315 LAYIGMFASND----LPFRECAGPVKLRLSGYLLTGTSGQECLQLTFLTPFWRNPLYFGLLAA-- 373
            :.::..:..|.    ||:..|.      |:|   ||...:||.:.:..|.||    |...|.|  
  Fly   156 ITWVFFYLFNSFRYPLPWSSCP------LNG---TGFELEECAKSSETTYFW----YRTTLDAAP 207

  Fly   374 -----GLIGLWIVVMLCTHNAKILRRSIFVFGLV-------GLVLLCT-------LTGWEVRNSF 419
                 |.:..|||  ||     ::.....||.:|       |.|:..|       ||.:.:|...
  Fly   208 SMDEPGGLKWWIV--LC-----LMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGIT 265

  Fly   420 SR-------H-YFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVR-T 475
            .|       | |.|::     ..|.|..:|.:|..||.:|....||:|.........|.:.|| .
  Fly   266 LRGAGAGLMHMYTPKV-----EKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDV 325

  Fly   476 SVVYLCFNLLINAI-----AVTLF-------MVQFD---------------LSSNGFQNMEELKP 513
            .:|.:|     ||:     :|.:|       .|..|               |..|..|..|:...
  Fly   326 LLVSVC-----NAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMS 385

  Fly   514 LTAIYDRVLNGSR-------------------EGD-------SHLLQHLVPSLIYALI------- 545
            |       |||:.                   ||.       :..:..|..:..:|::       
  Fly   386 L-------LNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLS 443

  Fly   546 --------ILSAMVSITVAVYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFLIARVLDSRLVGT 602
                    ||..|:.....:....|:..:....|:||...:|..|..........::.|| ..||
  Fly   444 LGLGSQIGILEGMLCTLFDIDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDS-FAGT 507

  Fly   603 --MVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGILV-------- 656
              :||.||: |:||:.:|||.:....|:....|....|.|.|.| .|.|.|:..|||        
  Fly   508 IGLVVVALM-EMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVI 571

  Fly   657 ------WWCADDDQYD---------------LLAEYLPRWAPILFVL 682
                  .|.||....:               :||..||  .||:|::
  Fly   572 RNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLP--MPIVFLM 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 130/562 (23%)
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 140/606 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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