DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and bdg

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster


Alignment Length:1127 Identity:232/1127 - (20%)
Similarity:384/1127 - (34%) Gaps:359/1127 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSYKPRSSDEALAEQF---SLARAGSGTKPPATPTYRQISGAMATL-----PRHDNNHNHNDNS 58
            |||....:|.|.:.:.:   |:.||.......||....:....:.||     ||.|         
  Fly   272 SSSGSLETSTEPVMDVWRRQSMRRALEQEDTKATVAMEREEDDIPTLLVELPPRRD--------- 327

  Fly    59 SRIRSDSTATSRTCVYIGG-----APTGGG-------------NGNEQISVTLDR-RQ------- 97
                    |..|.|...|.     |||.|.             ..|.:.|....| ||       
  Fly   328 --------AEMRRCFSQGDCQASVAPTVGSQMLTEAHIFDNLLQTNARASSEEPRPRQYGRRLEG 384

  Fly    98 ---PQRMSWLNMRRAKANETDLPTVTPSPQ--TTRSCISTVSSVVDSGGGRTTATSGRISSSGIV 157
               |.|...|...|.::..|.:....|..|  .|...:||.|.:       ::|.|.|:.|.  |
  Fly   385 PPTPVRPLILAQSRPQSAPTRVQMREPQLQDTPTHPIMSTCSEL-------SSARSSRMPSP--V 440

  Fly   158 TL-SDSNNTLSEIQGGYHDMDHDAVSKNFSISASAHNITTASNAKLLPAVEDESNKQTKCSV--- 218
            :| |||:::.|  ....||.:.|.|......|||       |...|.|..:.:...:.||..   
  Fly   441 SLPSDSSSSGS--SSAEHDQEPDPVQTTTMCSAS-------STTPLEPLHQLQLLLREKCGFNSQ 496

  Fly   219 -----FRGLVLCLCLNLSYANVVRFPRELDRYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQG 278
                 .|.|.|..| .|...|:.||......:|..:|:.:::|..:.|:|::.|::.:|..:..|
  Fly   497 WPHAGSRTLALIGC-TLGVFNMCRFAVLTINFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAG 560

  Fly   279 AAHTWRASPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLP--------FRECAGPV 335
            ....|:.|||..|.    ..|..:...:::|.:.::||:|.::..:..|        ::|.|.|.
  Fly   561 PVSMWKISPICAGV----GIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPY 621

  Fly   336 KLRLSGYLLTGTSGQECLQLTFLTPFWR-----NPLYFGL--------LAAGLIGLW--IVVMLC 385
            :...|.  .||...|...:...:....|     :|...|:        ||..|..:|  :.::||
  Fly   622 RYDASN--ATGNLTQTVAEYFNVVVLQRLHLANHPDASGIRFHVNDRQLAFYLALIWAAVFLILC 684

  Fly   386 THNAKILRRSIFVFGLVGLVLLCTLTG--------WEVRNSFSRHYFPELWGFDSNLLAESNIWF 442
             ...|.|.:..::...:.||.|..:|.        ..::|.|:...|       .:.|..||.|.
  Fly   685 -KGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDF-------DDFLVNSNSWT 741

  Fly   443 -----------------------------------NALMQVLFSVNCGFGALPMIT---GKFLYK 469
                                               :|::.|||:: .|.|.:.::.   .:.|: 
  Fly   742 AATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFTL-IGLGLMALLALCCAQILW- 804

  Fly   470 GDAVRTSVVYL--------CFNLLINAIAVT-LFMVQFDLS----------------------SN 503
                :...||:        |:..:.:..:.| .:::.:..|                      .:
  Fly   805 ----QHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVES 865

  Fly   504 GFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPSLIYALIILSAMVS------------ITVA 556
            |||   .|:.::.|:..||  |...||       .|.::|.:..:....            |:.|
  Fly   866 GFQ---ALRFISEIFPAVL--SLASDS-------ISWVWAAVAFATFAGFGLAQLCVMWKPISSA 918

  Fly   557 VYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFL-IARVLDSRLVGT----MVVTALVFELIAIT 616
            :..||..|     .:.|:.||::: |.||....: |...:|..|.|:    ::.||.:|.:..|.
  Fly   919 LGNSTSSV-----LLSCVTGLLLS-IPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIR 977

  Fly   617 W-IYGAKNIYTDLEFSIGRPIFRVWMWLWVICP------------AILTGILVWWCADDDQYDLL 668
            . .|...::..||........|....|. |:.|            |.|:....:|..        
  Fly   978 GRPYNGDDLVNDLRLCGSMSAFLALSWN-VLLPIGLITLSVVDYKASLSNQFYYWRG-------- 1033

  Fly   669 AEYLPRWAP------ILFVLAVIVIIACVQIFRQVEY---NFFGMICEASKPAKEW-GPADPLAR 723
            ..|...|:.      .:.||.||.:.|.:||:|.:.:   :....|....:|.:|. .|..|.||
  Fly  1034 KSYFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPPEEGEEPRRPSAR 1098

  Fly   724 HSWKQWR---------------------------SVCQDTGRRDFTLRRRGTRDYTHSIKK--GQ 759
            .:..|.|                           |....||.|...|.|:..|   .|:::  |.
  Fly  1099 QTASQSRRNALGQTTEGGQHDAQNDAPPKYTPPPSYTTATGARLAKLLRQSIR---RSVRRVLGD 1160

  Fly   760 YSSATKYGVQNGGQTQTPMHQQHWKSSTPGNSSPNY-------SGSMF------GDSAIEEDISV 811
             ||.|:           |:.....:|::|. :.|:|       :||.|      ..|:..|.|.:
  Fly  1161 -SSRTR-----------PVLSLDAESASPA-APPDYLTILTNPAGSSFNADPSPASSSSPESIEI 1212

  Fly   812 DKFP-----------------GITQQQYVPFQASDTKQ-SRYSQRIRQ--------TAQPQTQTQ 850
            |:.|                 |.:..:..|:.|.|... .|.|.|.||        ||    .|.
  Fly  1213 DQRPVGYSQRSQSLGRKLHRSGASTLERRPYTAEDVVTILRSSVRHRQSQGGGNLVTA----STL 1273

  Fly   851 MRPPRESVEKHREVVYIRRLSD 872
            .|||..::..|.|....|.:.:
  Fly  1274 PRPPTAAMSTHLEDASFRSIEN 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 108/569 (19%)
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 98/513 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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