DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and SLC6A18

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_872438.2 Gene:SLC6A18 / 348932 HGNCID:26441 Length:628 Species:Homo sapiens


Alignment Length:642 Identity:133/642 - (20%)
Similarity:237/642 - (36%) Gaps:165/642 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            |:.|....:...|:.|||.....| |.|:|:|||:.|...|:|:..:|:::||.|.:|:...|.|
Human    28 LLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVGVWTA 92

  Fly   286 -SPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSG 349
             ||...|..:.....|:|.:::.:......|.|:.....:.||:..|  |..|..:|::      
Human    93 ISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSC--PPDLNRTGFV------ 149

  Fly   350 QECLQLTFLTPFW-RNPLYF--GLLAAGLIGLWIVVMLCTHNAKILRRSIFVFGLVGLVLLCTLT 411
            :||...:.::.|| |..|..  .:..:|.|..|:::.|....|              :|.:|.:.
Human   150 EECQGSSAVSYFWYRQTLNITADINDSGSIQWWLLICLAASWA--------------VVYMCVIR 200

  Fly   412 GWEVRNSFSRHYFPELWGF--------------------------DSNLLAESNIWFNALMQVLF 450
            |.|......  ||..|:.:                          :.::|....:|.:|..|:.|
Human   201 GIETTGKVI--YFTALFPYLVLTIFLIRGLTLPGATKGLIYLFTPNMHILQNPRVWLDAATQIFF 263

  Fly   451 SVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIA-VTLFMVQFDLSSNGFQNMEELKPL 514
            |::..||...........:.|..:.:||....|.:.:..| :.:|.|....::|.:::..:...|
Human   264 SLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVLGFKATNDYEHCLDRNIL 328

  Fly   515 TAIYD---RVLNGSREGDSHLLQHL---VPSLIYALIILSAMV-----------SITVAVYTSTR 562
            :.|.|   ...:.||:....:|.||   .|..:..|.:.:.::           .:...|:|.|.
Human   329 SLINDFDFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLDKSASGPGLAFVVFTETD 393

  Fly   563 L-VPRRPNYVICLIGLVVAV---ISFAAPKFLIARVLD----SRLVGTMVVTALV---------- 609
            | :|..|.:.:...|::..:   ..|...:.:|..:||    .|.|....:|.||          
Human   394 LHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVPKEALTGLVCLVCFLSATC 458

  Fly   610 ---------------------------FELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VI 646
                                       .|::.:.::||.|....|:.:..||.....|...| |:
Human   459 FTLQSGNYWLEIFDNFAASPNLLMLAFLEVVGVVYVYGMKRFCDDIAWMTGRRPSPYWRLTWRVV 523

  Fly   647 CPAILT-----GILVWW-----CADDDQYDLL----AEYLPRWAPILFVLAVIVIIACVQIFRQV 697
            .|.:||     .||::|     .|.:.:|:|.    .:..|.||     .|..|:::.:.:.   
Human   524 SPLLLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYPGWA-----RAACVLLSLLPVL--- 580

  Fly   698 EYNFFGMICEASKPAKEWGPADPLA------RHSWKQWRSVCQDTGRRDFTLRRRGT 748
                             |.|...||      |.:|:. |....||..|..|..|..|
Human   581 -----------------WVPVAALAQLLTRRRRTWRD-RDARPDTDMRPDTDTRPDT 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 112/541 (21%)
SLC6A18NP_872438.2 SLC6sbd_B0AT3 17..591 CDD:212086 124/611 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..628 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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