DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and CG13796

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster


Alignment Length:586 Identity:115/586 - (19%)
Similarity:211/586 - (36%) Gaps:183/586 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 ELDRYG------SAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFA 299
            ||..:|      ..:::.|::.:....||:.|::..:|||...|....:|.:|||||........
  Fly   109 ELSTFGILHGGWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLL 173

  Fly   300 SWLSAIWVSLQAVLALAYI---------GMFASNDLPFRECAGPVKLRLSGYLLTGTSGQECLQ- 354
            :..:..:.|:.||:.|.|.         .|..:|....:||:......:..|.:...|..|..: 
  Fly   174 NLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENYDVDDYRVDPHSTVEFFRS 238

  Fly   355 --------LTFLTPFWRNPLYFGLLAAGLIGLWIVVML-----CTHNAKILRRS-IFVFGLVGLV 405
                    .|.::..|.       :..|::.:|:||:.     .....|:||.| :.:||....|
  Fly   239 MIASTAKGSTSMSISWS-------MLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAV 296

  Fly   406 LLCTLTGWEVRNSF-SRHYF--PELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFL 467
            .|..|...:|  :| :.||:  |:|..||| :||.:.   .||:....::..|:|::..::....
  Fly   297 FLYLLIHEQV--TFDTLHYYWMPQLDSFDS-ILATAR---TALLMAGGALGPGWGSIITLSSYNN 355

  Fly   468 YKGDAVRTSV-------------------------------------------VYLCFNLLINAI 489
            ::.||.|.|:                                           :||||:.|....
  Fly   356 FRRDAERLSIWVCLTHITIGLMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRF 420

  Fly   490 AVT------LFMVQFDLSSNGFQNMEELKPLTAIYD--------RVLNGSREGDSHLLQHLVPSL 540
            ..|      ||.....||......::.:..:||::|        |:|             ::.||
  Fly   421 TTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSRRIL-------------VISSL 472

  Fly   541 IYALIILSAMVSITVAVYTSTRL----VPRRPNYVICLIGLVVAVISFAAPKFLIARVLDSRLVG 601
            ::.|...|        ||..|:|    :.:.||         :||.:    ..||:.:|      
  Fly   473 VFCLTASS--------VYFCTQLGFSQLTQLPN---------LAVFT----HLLISGIL------ 510

  Fly   602 TMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLWVICPAILTGI----LVWWCADD 662
                      ::..||:||......||:|.:|:.|....::.......|..|:    |.:....|
  Fly   511 ----------VLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQLTYLFTRD 565

  Fly   663 DQYDLLAEYLPRWAPILFVLAVIVIIACVQIFRQVEYNFFGMICEASKPAKEWGP--ADPLARHS 725
            ..:|:|          ::|...::::..:..          |:.:..:...:|..  ...||.|.
  Fly   566 RIHDVL----------IYVSQGLILLTAISY----------MVYKVCRTNGDWRQRLQQCLAPHD 610

  Fly   726 W 726
            |
  Fly   611 W 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 105/515 (20%)
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 110/569 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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