DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a19b

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:585 Identity:126/585 - (21%)
Similarity:229/585 - (39%) Gaps:129/585 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            ::.|:...:...||.|||.....: |.|:::|:::||...|:|::.||.::||.|.:|:...||.
Zfish    43 MLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLLHLEFAIGQRLRKGSVGVWRT 107

  Fly   286 -SPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSG 349
             :|...|..:.|...|:|.:::.:......:.|......:.||:.:|  |:....:|.:      
Zfish   108 INPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWSQC--PINENRTGPI------ 164

  Fly   350 QECLQLTFLTPFW-RNPLYF--------GL---LAAGLIGLWIVV-MLCTHNAKILRRSIFVFGL 401
            .||.:.:.:..|| |..|..        ||   :...||..|.|: :.|....:...::::|...
Zfish   165 PECGKSSPVDYFWYRETLNTSAAIDDTGGLQVWMVLCLISAWAVLYVCCIRGIETTGKAVYVTST 229

  Fly   402 VGLVLLC--TLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITG 464
            :..::|.  .:.|..::.|.....|  |:..|.|.||..:.|.:|..||.:|.:..||.|...:.
Zfish   230 LPYLVLTIFLIRGLTLKGSVDGIKF--LFTPDINELANPSTWLDAGAQVFYSFSLAFGGLISFSS 292

  Fly   465 KFLYKGDAVRTSVVYLCFNLLINAIAVTLF--------MVQFDLSSNG----------------- 504
            ......:..:.:|:....|...:..|.|:.        ..:||...||                 
Zfish   293 YNSVHNNCEQDAVIISVINAFTSIYAATVIYSIIGFRATERFDDCMNGNILTLLNTFDLPEGFIN 357

  Fly   505 -------FQNMEELKP--------LTAIYDRVLNGSREG---------DSHLLQHLVP--SLIYA 543
                   ||::....|        .|...:..|:...||         ::.....|.|  |:::.
Zfish   358 QSNYQDVFQSLNSTSPDIISSLSLKTCDLNNFLSEGVEGTGLAFIVFTEAITKMPLSPLWSVLFF 422

  Fly   544 LII----LSAMVSITVAVYTSTRLVPRR---------PNYVI--------CLIGLVVAVISFAAP 587
            :::    ||:|......|     |||.:         |..:|        ||:||:...   .:.
Zfish   423 IMLFCLGLSSMFGNIEGV-----LVPLQDLGVFPKSWPKEIISGVTCLVCCLVGLIFVQ---GSG 479

  Fly   588 KFLIARVLDSRLVGTMVVTALVF-ELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAI 650
            .:.:| :.|| ..|::.:..:.| |:|.:.::||......||.|.||......|...| .|.|.|
Zfish   480 NYWLA-LFDS-FAGSIPLLIIAFSEMIGVVYVYGIDRFNEDLIFMIGHKPNIFWQATWRFISPLI 542

  Fly   651 LTGILVW--------------WCADDDQYDLLAEY-LPRWA-PILFVLAVIVIIAC--VQIFRQV 697
            :..|.|:              |..:.:.:..|.:. .|.|. .|:|:||.:..:|.  ..:||.:
Zfish   543 MLAIFVFYFSTTVTKEIFYSAWDPESENFPTLEKKPYPTWIYVIIFLLAGVPSLAVPGTAVFRAI 607

  Fly   698  697
            Zfish   608  607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 115/541 (21%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 126/585 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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