DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a16

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_038949993.1 Gene:Slc6a16 / 292902 RGDID:1561338 Length:850 Species:Rattus norvegicus


Alignment Length:750 Identity:154/750 - (20%)
Similarity:278/750 - (37%) Gaps:221/750 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 MRRAKANETDLPTVTPSPQTTRSCI-------STVSSVVDS-------GGGRTTATSGRISSSGI 156
            :.:::|:.:|.|..:...:|:.|.:       :|..|.:||       |...|.:||..|:.:.:
  Rat   106 LAKSRASASDRPEESSLVKTSGSSLDKNVSIETTKLSEMDSNLLVWEDGTLATWSTSAWIAQAQV 170

  Fly   157 VTLSDSNNTLSEIQGGYHDMDHDAVSKNFSISASAHNI-------TTASNAKLLPAVED--ESNK 212
                 |.:.:::.|..          :..::.|.|...       ||..:.:..|..|.  |.||
  Rat   171 -----SESRVAKAQAW----------ETLALEAQARGALQFNKPSTTEYSMETTPKQESPIELNK 220

  Fly   213 QTK--CSVFRGLVL-------CLCLNLSY----ANVVRFPRELDRYGS-AYLVPYVVLLFLVGLP 263
            .:|  .:||...:|       .|.| :.|    :.::||.......|| ::.:.|:::||.:|:|
  Rat   221 TSKENSNVFPPWLLWSSKAEYILAL-MGYLVMPSGLLRFVTCWVHKGSWSFFIAYLLMLFGLGIP 284

  Fly   264 MVLLEISVGQFLGQGAAHTWRA-SPIFKG-------ACMISR-----FASWLSAIWVSLQAVLAL 315
            ::.||::|||...|.:...|:. ||.|.|       .|:|:.     |.||:         :..:
  Rat   285 LLFLEMAVGQRAQQSSIDLWKTLSPWFGGLGYSMVMVCLITNTYLNVFNSWI---------LFYM 340

  Fly   316 AYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSGQECLQLTFLTPFW-RNPL------------Y 367
            ::|..|.   :|:..|  |::...|.:      ..||.|.|..|.|| |..|            .
  Rat   341 SHIFHFV---VPWDRC--PLQKNSSDF------DPECEQATSYTYFWYRQTLKASDSIEDGGQPS 394

  Fly   368 FGLLAAGLIGLWIVVMLCTHNAKILRRSIFVFGLVG-LVLLCTLTGWEVR-----NSFSRHYFPE 426
            |.|.....:...::.:...:..|.|.:.:.|...|. .:::|.|    ||     |..       
  Rat   395 FNLAMFLFLAWCLICVFMVNGIKSLGKVLCVLLQVPYFIIICFL----VRTLSMGNGI------- 448

  Fly   427 LWGFDSNLL--------AESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFN 483
              |:..|.|        ::..:|..|.:||||.:..|||.:..::.......:.::.:.:...|.
  Rat   449 --GYGLNYLLILEVARISDLTMWCQAGIQVLFDIGLGFGPVISLSSHMSDFNNCLKDAFLMGLFK 511

  Fly   484 LLINAIAVTLFMVQFDLSSNGF-----------QNMEELKPLTA-------------------IY 518
                 |...|....|.||..||           :|..:|..|.|                   ||
  Rat   512 -----IVTLLITTPFFLSILGFWATITTHHCCKKNTNKLLMLIAQGILPPEVEPPDLNDDPISIY 571

  Fly   519 DRVLNG----------------------SREGDS---------HLLQHLVPSLIYALIILSAMVS 552
            :..||.                      .|..||         .::..|..|..:.::...|::.
  Rat   572 NSWLNSLPPPLRSAVLSMVPECNIQKQFMRIEDSPRFLFLIFTEVISLLPGSAFWTVLFFLALLG 636

  Fly   553 I---TVAVYTSTRLVPRRPNYVIC-----LIGLVVAVISFAAPKFLIA-------RVLDSRLVGT 602
            :   |..:|....::..:..:..|     |:.:.|::.:|......|.       .:|....|..
  Rat   637 LGLCTNLMYMLGNILTLQDTFPFCRRQPRLLTVGVSMTTFLCGLIFIQPSGIYYFSLLSEYWVAV 701

  Fly   603 MVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGILVWWCA------ 660
            .::|.::.|.:|:.|.||||....|:...:.||||....||| .:.|.:|.|:|::.|.      
  Rat   702 PIITIILCETLAVAWAYGAKRFLADMMALLSRPIFPGCSWLWRYVSPVVLLGLLLFICIYLVQGP 766

  Fly   661 ------DDDQYDLLAEYLPRWAPILFV-LAVIVII 688
                  |......:..|.|.|:.:|.. |:.:|::
  Rat   767 LVYMAWDSSTSKEVVRYFPMWSLMLIAGLSAVVLM 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 119/568 (21%)
Slc6a16XP_038949993.1 SLC6sbd_NTT5 232..802 CDD:271392 126/608 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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