DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and SLC6A16

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_011525161.2 Gene:SLC6A16 / 28968 HGNCID:13622 Length:781 Species:Homo sapiens


Alignment Length:559 Identity:112/559 - (20%)
Similarity:199/559 - (35%) Gaps:170/559 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 LDRYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-ASPIFKGACMISRFASWLSAI 305
            |:..|.::...|:.:|||||:|::.||::.||.:.||....|: .:|...|....|....::..:
Human   216 LNSGGCSFAAIYIFMLFLVGVPLLFLEMAAGQSMRQGGMGVWKIIAPWIGGVGYSSFMVCFILGL 280

  Fly   306 WVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSGQECLQLTFLTPFW-------- 362
            :.::.....:.|:.......:|:.:|  |:.:..||:      ..||.:.|....||        
Human   281 YFNVVNSWIIFYMSQSFQFPVPWEKC--PLTMNSSGF------DPECERTTPSIYFWYQQALKAS 337

  Fly   363 ------RNPLYFGLLAAGLIGLWIVVMLCTHNAKILRRSIFVFGLVGLVLLCTLTGWEVRNSFSR 421
                  .:|:|         .|.:...||             :.|||..:   :.|.:.....|.
Human   338 DRIEDGGSPVY---------SLVLPFFLC-------------WCLVGAFM---INGLKSTGKISD 377

  Fly   422 HYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLI 486
            .|             ..::|..|..|||.:...|.|::..:........:.:..:.:....||| 
Human   378 VY-------------NMSVWSLAGGQVLSNTGIGLGSVASLASYMPQSNNCLSDAFLVSVINLL- 428

  Fly   487 NAIAVTLFMVQFDLSSNGF-----------QNMEELKPL--------------------TAIYDR 520
                ..|....|:....||           :|.|.|..|                    |:||:.
Human   429 ----TLLVFTSFNFCVLGFWATVITHRCCERNAEILLKLINLGKLPPDAKPPVNLLYNPTSIYNA 489

  Fly   521 VLNG------------------------SREGDS-------HLLQHLVPSLIYALII-------- 546
            .|:|                        :.||..       ..:..|.||:.::.|.        
Human   490 WLSGLPQHIKSMVLREVTECNIETQFLKASEGPKFAFLSFVEAMSFLPPSVFWSFIFFLMLLAMG 554

  Fly   547 LSAMVSITVAVYTSTRLVPR-------RPNYVICLIG----LVVAVISFAAP--KFLIARVLDSR 598
            ||:.:.|...:.|     |.       |.:..:.::|    :.|..:.|..|  .:.| |:|...
Human   555 LSSAIGIMQGIIT-----PLQDTFSFFRKHTKLLIVGVFLLMFVCGLFFTRPSGSYFI-RLLSDY 613

  Fly   599 LVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLWV-ICPAIL----TGILVWW 658
            .:...::..:|||.:|::|.|||:....||...:|.||..::.|||. :||.:|    ..::|..
Human   614 WIVFPIIVVVVFETMAVSWAYGARRFLADLTILLGHPISPIFGWLWPHLCPVVLLIIFVTMMVHL 678

  Fly   659 CADDDQY---------DLLAEYLPRWAPILFVLAVIVII 688
            |.....|         ::|..| |.||.:|.:....::|
Human   679 CMKPITYMSWDSSTSKEVLRPY-PPWALLLMITLFAIVI 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 103/519 (20%)
SLC6A16XP_011525161.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.