DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a11

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_766478.1 Gene:Slc6a11 / 243616 MGIID:95630 Length:627 Species:Mus musculus


Alignment Length:542 Identity:126/542 - (23%)
Similarity:219/542 - (40%) Gaps:118/542 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASP 287
            :...||.|||     |      |.|:|:||||.....|:|:..||.::|||..:|....| |..|
Mouse    63 IGLGNVWRFP-----YLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRRVCP 122

  Fly   288 IFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASN----DLPF---------RECAGPVKLRL 339
            :|:|.    .:|:.:....:::..::.||:...:.||    :||:         .:|....||..
Mouse   123 LFEGI----GYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEKCVEFQKLNF 183

  Fly   340 SGY----LLTGTSGQECLQLTFLTPFWRNPL--------YFG----LLAAGLIGLWIVVMLCT-H 387
            |.|    |...||.        :..||...:        :.|    .||..|:..|.:...|. .
Mouse   184 SNYSHVSLQNATSP--------VMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWK 240

  Fly   388 NAKILRRSIFV---FGLVGLVLL----CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNAL 445
            ..|...:.::|   |..:.|::|    .||.|  .......:.:|:|     :.|::..:|.:|.
Mouse   241 GTKSTGKVVYVTATFPYIMLLILLIRGVTLPG--ASEGIKFYLYPDL-----SRLSDPQVWVDAG 298

  Fly   446 MQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNME 509
            .|:.||.....|.|..:.....|..:..|..::..|.|      :.|.|:..|.: |..||...|
Mouse   299 TQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLN------SGTSFVAGFAIFSVLGFMAYE 357

  Fly   510 ELKPLTAIYDRVLNGSREGDSHL----------LQHLVPSLIYALIIL----SAMVSITVAVYTS 560
            :..|:..:.:     |..|.:.:          |..|..:|.:.::|.    |..|.:...|...
Mouse   358 QGVPIAEVAE-----SGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAV 417

  Fly   561 TRLVPR--RPNYVICLIGLVVAVISFAAPKFL-----------IARVLDSRLV-GTMVVTALVFE 611
            ..:.|:  |..|...|:.|.:::||:    ||           |.::.||... |..::...:||
Mouse   418 VDMYPKVFRRGYRRELLILALSIISY----FLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFE 478

  Fly   612 LIAITWIYGAKNIYTDLEFSIG-RPIFRVWMWLW-VICPAILTGILVWWCADDD--QYDLLAEYL 672
            .:.|.|:||:...|.::|..|| ||:..: .|.| |:.|.|..||.:::.....  :|:.:..| 
Mouse   479 CVCIGWVYGSNRFYDNIEDMIGYRPLSLI-KWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTY- 541

  Fly   673 PRWAPILFVLAVIVIIACVQIF 694
            |.|...:..|..:..:.|:.::
Mouse   542 PAWGYGIGWLMALSSMLCIPLW 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 120/503 (24%)
Slc6a11NP_766478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
SLC6sbd_GAT3 44..585 CDD:212077 126/542 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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