DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and Slc6a7

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_006525992.1 Gene:Slc6a7 / 240332 MGIID:2147363 Length:684 Species:Mus musculus


Alignment Length:590 Identity:143/590 - (24%)
Similarity:248/590 - (42%) Gaps:147/590 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFP-RELDRYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            |:.|:...:...||.||| |.....|.|:||||.::|.:.|:|:..||:|:|||...|....|:.
Mouse    94 LLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFLMLAICGIPLFFLELSLGQFSSLGPLAVWKI 158

  Fly   286 SPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECA------------GPVKLR 338
            ||:||||.........|.||:.::.....|.|:....:::||:..|.            ||    
Mouse   159 SPLFKGAGAAMLLIVGLVAIYYNMIIAYVLFYLFASLTSNLPWEHCGNWWNTELCLEHRGP---- 219

  Fly   339 LSGYLLTGTSGQECLQLTF---LTP---FW-RNPLYF----GL---------LAAGLIGLWIVVM 383
                    .||...|.|..   ::|   :| |..|:.    |:         |...|:..|::|.
Mouse   220 --------KSGNGVLPLNLSSTVSPSEEYWSRYVLHIQGSQGIGRPGEIRWNLCLCLLLAWVIVF 276

  Fly   384 LC-----THNAKILRRSIFVFGLVGLVLL---CTLTG-WEVRNSFSRHYFPELWGFDSNLLAESN 439
            ||     ..:.|::..:.....|:.|:||   .||.| |:   ....:..|:.     :.|..|.
Mouse   277 LCILKGVKSSGKVVYFTATFPYLILLMLLVRGVTLPGAWK---GIQFYLTPQF-----HHLLSSK 333

  Fly   440 IWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSN 503
            :|..|.:|:.:|:..|||.|........:..:..|.:.:....|      |:|..:..|.: |..
Mouse   334 VWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGN------AITSILAGFAIFSVL 392

  Fly   504 GFQNMEELKPLT-----------AIYDRVLNGSREGDSHLLQHLVP--SLIYALIILS------- 548
            |:.:.|...|:.           .:|.:.:.         :..|.|  |.::..::|:       
Mouse   393 GYMSQELGVPVDQVAKAGPGLAFVVYPQAMT---------MLPLSPFWSFLFFFMLLTLGLDSQF 448

  Fly   549 AMVSITVAVYTST---RLVPRRPNY--VIC----LIGLVVAVISFAAPKFLIARVLD--SRLVGT 602
            |.:...|...|..   .|.|::..:  :||    |:||::.  :.....:|:  :||  |...|.
Mouse   449 AFLETIVTAVTDEFPYYLRPKKAVFSGLICVAMYLMGLILT--TDGGMYWLV--LLDDYSASFGL 509

  Fly   603 MVVTALVFELIAITWIYGAKNIYTDLEFSIG-RP--IFRVWMWLWVICPAILTGILVWWCADDDQ 664
            |||  ::...:|:|.:||.:....|:...:| :|  .||. .||: :.||.|..:||        
Mouse   510 MVV--VITTCLAVTRVYGIQRFCRDIHMMLGFKPGLYFRA-CWLF-LSPATLLALLV-------- 562

  Fly   665 YDLL----AEY----LPRWAPILFVLAVIVIIAC--------VQIFRQVEYNFFGMICEASKPAK 713
            |.::    :||    .|.||.:|.:|  :.:::|        |.:.|: |.:.:..:.:||:||.
Mouse   563 YSIVKYQPSEYGSYRFPAWAELLGIL--MGLLSCLMIPAGMLVAVLRE-EGSLWERLQQASRPAM 624

  Fly   714 EWGPA 718
            :|||:
Mouse   625 DWGPS 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 124/513 (24%)
Slc6a7XP_006525992.1 SLC5-6-like_sbd 84..628 CDD:382020 141/587 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.