DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a17

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001280618.1 Gene:Slc6a17 / 229706 MGIID:2442535 Length:727 Species:Mus musculus


Alignment Length:833 Identity:159/833 - (19%)
Similarity:286/833 - (34%) Gaps:262/833 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 SEIQGGYHDMDHD--------AVSKNFSISASAHNITTASNAKLLPAVE--DESNKQTKCSVFRG 221
            |::....|..:|.        |:.:......|..|:...:..|...|.|  |..::....|..:.
Mouse     5 SKVTQREHSNEHVTESVADLLALEEPVDYKQSVLNVAGETGGKQKVAEEELDTEDRPAWNSKLQY 69

  Fly   222 LVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR- 284
            ::..:..::...|:.|||....:. |.||||||:|||.::|:|:..||::|||.:.:|:...|. 
Mouse    70 ILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQRIRRGSIGVWHY 134

  Fly   285 ASPIFKGACMISRFASWLSAIWVSL--QAVLALAYIGMFAS--NDLPFRECAGPVKLRLSGYLLT 345
            ..|...|.    .|:|.:..::|.|  ..::..:....|.|  ..||:.||  ||       :..
Mouse   135 VCPRLGGI----GFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSEC--PV-------IRN 186

  Fly   346 GTSG---QECLQLTFLTPFW-RNPLYFG-----------------LLAAGLIGLWIVVMLCTHNA 389
            ||..   .||.:.:..|.|| |..|...                 |:|..::|:.:|..:.:...
Mouse   187 GTVAVVEPECEKSSATTYFWYREALDISNSISESGGLNWKMTLCLLVAWSIVGMAVVKGIQSSGK 251

  Fly   390 KILRRSIFVFGLVGLVLLCTLTGWEVRNSFSR-------HYF-PELWGFDSNLLAESNIWFNALM 446
            .:...|:|.:    :||.|.|    ||....|       |.| |:|     :.:.:..:|..|..
Mouse   252 VMYFSSLFPY----VVLACFL----VRGLLLRGAVDGILHMFTPKL-----DKMLDPQVWREAAT 303

  Fly   447 QVLFSVNCGFGALPMITGKFLYKG-------DAVRTSVVYLCFNLLINAIAVTLFMVQFDLSSN- 503
            ||.|::..|||.:...:.   |..       ||...|.:    |...:.:|..:........:| 
Mouse   304 QVFFALGLGFGGVIAFSS---YNKQDNNCHFDAALVSFI----NFFTSVLATLVVFAVLGFKANI 361

  Fly   504 --------------GFQNMEEL----------------KPLTAIYDRV----------------- 521
                          |:.|...|                |..:.:|..:                 
Mouse   362 MNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYSVIMTVKEKQFPALGLDPCL 426

  Fly   522 ----LNGSREGD-------SHLLQHLVPSLIYALIILSAMVSITVAVYTSTRLVPRRPNYVICLI 575
                |:.|.:|.       :..:.|...|..::::....::::.:.....|            :.
Mouse   427 LEDELDKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMIGT------------MA 479

  Fly   576 GLVVAVI-SFAAPK--FLIARVLDSRLVG--------------------TMVVTALV-FELIAIT 616
            |:...:| :|..||  |.:...:.:..||                    |:.:|.:| .|.||:.
Mouse   480 GITTPIIDTFKVPKEMFTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSATLPLTVIVILENIAVA 544

  Fly   617 WIYGAKNIYTDLEFSIGRPIFRVWMWLW----VICPAILT------------GILVWWCADDDQY 665
            ||||.|....:|...:|...:|.:.::|    .:|.|:||            |...|...:..:.
Mouse   545 WIYGTKKFMQELTEMLGFQPYRFYFYMWKFVSPLCMAVLTTASIIQLGVSPPGYSAWIKEEAAER 609

  Fly   666 DLLAEYLPRWAPILFVLAVIVIIACVQIFRQVEYNFFGMICEASKPAKEWGPADPLARHSWKQWR 730
            .|   |.|.||  :.:|..::.:|.:.|                       |...:.||      
Mouse   610 YL---YFPNWA--MALLITLIAVATLPI-----------------------PVVFILRH------ 640

  Fly   731 SVCQDTGRRDFTLRRRGTRDYTHSIKKGQYSSATKYGVQNGGQTQTPMHQQHWKSSTPGNSSPNY 795
                      |.|...|:...:.|.|||:...... .::...:|:..:.:...::.:|..:..:|
Mouse   641 ----------FHLLSDGSNTLSVSYKKGRMMKDIS-NLEENDETRFILSKVPSEAPSPMPTHRSY 694

  Fly   796 SGSMFGDSAIEEDISVDKFPGITQQQYVPFQASDTKQSRYSQRIRQTAQPQTQ 848
            .|                 ||.|.    |...|:....||.......:.|:::
Mouse   695 LG-----------------PGSTS----PLDNSNNPNGRYGSGYLLASTPESE 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 118/580 (20%)
Slc6a17NP_001280618.1 SLC6sbd_NTT4 60..648 CDD:271403 132/676 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727 11/68 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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