DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a6

DIOPT Version :10

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_033346.2 Gene:Slc6a6 / 21366 MGIID:98488 Length:621 Species:Mus musculus


Alignment Length:561 Identity:134/561 - (23%)
Similarity:213/561 - (37%) Gaps:161/561 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 NVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASPIFKG 291
            ||.|||     |      |.|:|:||.:.||..|||:..||:.:||:..:|....| :..|:|.|
Mouse    63 NVWRFP-----YLCYKNGGGAFLIPYFIFLFGSGLPVFFLEVIIGQYTSEGGITCWEKICPLFSG 122

  Fly   292 ACMISRFASWLSAIWVSLQ-----AVLALAYIGMFAS--NDLPFREC----------AGPVKLRL 339
                   ..:.|.:.|||.     .:||.|...:|.|  .|||:..|          ...::...
Mouse   123 -------IGYASIVIVSLLNVYYIVILAWATYYLFHSFQKDLPWAHCNHSWNTPQCMEDTLRRNE 180

  Fly   340 SGYLLTGTSGQECLQLTFLTP---FW-RNPLYF--GL---------LAAGLIGLWIVVMLC---- 385
            |.::...|:       .|.:|   || ||.|..  |:         ||..|:.:|:|...|    
Mouse   181 SHWVSLSTA-------NFTSPVIEFWERNVLSLSSGIDNPGSLKWDLALCLLLVWLVCFFCIWKG 238

  Fly   386 -THNAKILR-RSIFVFGLVGLVLL---CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNAL 445
             ....|::. .:.|.|.:: ||||   .||.|  .......:.:|     |.:.|.:..:|.:|.
Mouse   239 VRSTGKVVYFTATFPFAML-LVLLVRGLTLPG--AGEGIKFYLYP-----DISRLGDPQVWIDAG 295

  Fly   446 MQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFN---LLINAIAVTL---FMVQ------F 498
            .|:.||.....||:..:.....||.::.|..::..|.|   ..::..|:..   ||.|      .
Mouse   296 TQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSILGFMAQEQGVDIA 360

  Fly   499 DLSSNG-------FQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPSLIYALIILSAMVSITVA 556
            |::.:|       :.....:.||...:.                   .|.:.:::|..:.|..|.
Mouse   361 DVAESGPGLAFIAYPKAVTMMPLPTFWS-------------------ILFFIMLLLLGLDSQFVE 406

  Fly   557 VYTS-TRLVPRRPNY------------VICLIGLVVAVISFAAPKFLIARVLDSRLV-GTMVVTA 607
            |... |.||...|::            ::|.|..::.:.........:.::.|.... |..::..
Mouse   407 VEGQITSLVDLYPSFLRKGYRREIFIAILCSISYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWV 471

  Fly   608 LVFELIAITWIYGAKNIYTDLEFSIG-RPIFRVWM-WLW-VICPAILTGILVWWCADDDQYDLLA 669
            ..||...|.||||..|:|..:|..|| ||  ..|| :.| ||.||:..|..|:         .|.
Mouse   472 AFFECFVIAWIYGGDNLYDGIEDMIGYRP--GPWMKYSWAVITPALCVGCFVF---------SLV 525

  Fly   670 EYL----------PRWA----------PILFVLAVIVIIAC 690
            :|:          |.||          .:|.:..||||:.|
Mouse   526 KYVPLTYNKVYRYPDWAIGLGWGLALSSMLCIPLVIVILLC 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 123/508 (24%)
Slc6a6NP_033346.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
SLC5-6-like_sbd 41..582 CDD:444915 134/561 (24%)
Blue background indicates that the domain is not in the aligned region.

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