DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a2

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:563 Identity:130/563 - (23%)
Similarity:218/563 - (38%) Gaps:163/563 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 ANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKG 291
            |||.|||     |      |.|:|:||.:.|.:.|:|:..:|:::||:..:|||..|:..|.|||
Mouse    77 ANVWRFP-----YLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKICPFFKG 136

  Fly   292 ACMISRFASWLSAIWVSL--QAVLALAYIGMFAS--NDLPFR---------ECAGPVKLRLS--- 340
            .    .:|..|.|::|..  ..::|.:...:|||  .:||:.         .|..|..|..|   
Mouse   137 V----GYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHSWNSPNCTDPKLLNASVLG 197

  Fly   341 -------------------GYL-LTGTSGQE-----------CLQLTFLTPFWRNPLYF----GL 370
                               |.| |..:||..           ||.:..:.      |||    |:
Mouse   198 DHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVIVV------LYFSLWKGV 256

  Fly   371 LAAGLIGLWIVVMLCTHNAKILRRSIFVFGLVGLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLL 435
            ..:|.: :||...|          ..||. .|.||...||.|  ..|..:.:..     .|...|
Mouse   257 KTSGKV-VWITATL----------PYFVL-FVLLVHGVTLPG--ASNGINAYLH-----IDFYRL 302

  Fly   436 AESNIWFNALMQVLFSVNCGFGALPMIT--GKF---LYKGDAVRTSVVYLCFNLLINAIAVTLFM 495
            .|:.:|.:|..|:.||:..|||.|....  .||   .|: ||:.||.:. |....|:..|:  |.
Mouse   303 KEATVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYR-DALLTSTIN-CVTSFISGFAI--FS 363

  Fly   496 VQFDLSSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVP------------SLIYALIILS 548
            :...::.....|:|::             :.|| :.|:..|.|            ::::.|::|:
Mouse   364 ILGYMAHEHKVNIEDV-------------ATEG-AGLVFILYPEAISTLSGSTFWAVLFFLMLLA 414

  Fly   549 --------AMVSITVAVYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFLIAR-------VLDSR 598
                    .|.::...:....:::.|......|    ||.:.:|....|.|.:       :||:.
Mouse   415 LGLDSSMGGMEAVITGLADDFQVLKRHRKLFTC----VVTISTFLLALFCITKGGIYVLTLLDTF 475

  Fly   599 LVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGILVW----- 657
            ..||.::.|::.|.|.::|.||......|::..:|......|...| .:.||.|..::|.     
Mouse   476 AAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINF 540

  Fly   658 --WCADDDQYDLLAEYLPRWAPIL---FVLAVIVIIACVQIFR 695
              ...||..|       |.||..:   ..|:.::::....|::
Mouse   541 KPLTYDDYTY-------PPWANWVGWGIALSSMILVPAYVIYK 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 122/522 (23%)
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
SLC5-6-like_sbd 56..615 CDD:382020 130/563 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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