DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and F56F4.3

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_491770.3 Gene:F56F4.3 / 186398 WormBaseID:WBGene00018980 Length:701 Species:Caenorhabditis elegans


Alignment Length:688 Identity:143/688 - (20%)
Similarity:257/688 - (37%) Gaps:187/688 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 DSNNTLSEIQGGYHDMDHDAVSKNFSISASAHNITTASNAKLLPA-VEDESNKQ-------TKCS 217
            ||..:.||...|....|:|   :..:||.:       .|..|.|: :|.|..:|       ::.|
 Worm    53 DSTESSSENPDGIEKFDND---EELAISPT-------GNPNLNPSKIEAEELEQEIGSRNISRPS 107

  Fly   218 VFRGLVLCL-CLNLSYANVVRFPRELDRYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAH 281
            .:|.|.|.| |:.|...|:|......:..|..:.|||.::||::|:||.:.|:|:.||       
 Worm   108 TYRQLSLLLSCVTLLKNNMVFIECFFNHGGVYFFVPYFIILFVLGVPMAIFELSLAQF------- 165

  Fly   282 TWRASPIFKGACMISRFASWLSAI-WVSL-QAVLALAYIG------MFA---------------- 322
               :|....|  |.:|.|..|..| |:.| ..::...||.      ::|                
 Worm   166 ---SSIPMNG--MFTRMAPMLGGIPWLILCLRIIYTVYIAFDPRFLLYAYKSFVTVITGNMNWIH 225

  Fly   323 SNDLPFRECAGPV-KLRLSGYLLTGTSGQECLQLTFLTPFWRNP-----LYFGL----------- 370
            .:|.....|..|. ..:::.:.|.|    ||::...:....:..     .||||           
 Worm   226 CDDYKGVRCFDPTWSCKINEFRLNG----ECVKDVHIRKLAQQQDYGLLTYFGLREYRLISIIPS 286

  Fly   371 --------------LAAGLIGLWIVVMLCTHNAKILRRSI---FVF-GLVGLVLLCTLTGWEVRN 417
                          :.|.|:.| ::....|:.......|:   ||| .::|::....|..::| .
 Worm   287 QIYKEINGLDIMDNILAALVFL-LIAGFITYKGHRFFASLAGFFVFLPILGMIPAVILVYYDV-G 349

  Fly   418 SFSRHYFPE-LWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSV---- 477
            |..:|:|.: |...|...:.|.:.|.||....:.:|....|.|..:..:..::.:.::.:|    
 Worm   350 SRKKHFFNQILKNNDITKIFELSAWLNAARVTVKTVYIADGTLMALGSRADFRHNFIKDAVLLAA 414

  Fly   478 ------VYLCFNLL---------INAIAVTLF----MVQFDLSSNGFQNMEELKPLTAIYDRVLN 523
                  :.|||.:|         :...|.|::    :|||......|..:    |..||      
 Worm   415 SGATYRLLLCFGILPILYVANDILYPFAKTVYARGDLVQFHAIELFFSAL----PSYAI------ 469

  Fly   524 GSREGDSHLLQHLVPSLIYALI----ILSAMVSITVAVYTSTRLVPR-----RPNYVICLIGLVV 579
               .|.|..:...|.:::|..|    :...:::..:.:.....|.||     :.:..||:|...|
 Worm   470 ---PGISPTVTFFVYAMLYGTINFAFVAYQVITFEMLINALHHLFPRLLYLKQKSVRICIIMATV 531

  Fly   580 AVISF----AAPKFLIA------RVLDSRLVGTMVVTALVFELIAITWIYGAK----NIYTDLEF 630
            .::.|    :.|...:|      ..:|..:|| :|.|.:..:||:::.:||.|    |..|.|:.
 Worm   532 TLLLFLYILSLPYKQLAVGYQKELAIDDYVVG-LVSTTVFIQLISVSIVYGYKRLLINFLTMLKH 595

  Fly   631 SIGRP----------IFRVWMW---LWVICPAILTGILVWWCADDDQYDLLAEYLPRWAPILFVL 682
               .|          :|...||   |.:.|...:..|:|      .:|.:.     .|..:|:  
 Worm   596 ---HPVTYKLVEKCRVFLYVMWAFFLPISCLVSICSIIV------KKYQIY-----HWPLVLY-- 644

  Fly   683 AVIVIIACVQIFRQVE-YNFFGMICEASKPAKEWGPAD 719
            |.|..:..:.:.|::. |...............|.||:
 Worm   645 AAISALPLIYLARKLTMYIMRKEFVSGLSQTHRWQPAN 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 117/559 (21%)
F56F4.3NP_491770.3 SLC5-6-like_sbd 73..620 CDD:382020 123/588 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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