DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and snf-7

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_499702.2 Gene:snf-7 / 176723 WormBaseID:WBGene00004906 Length:705 Species:Caenorhabditis elegans


Alignment Length:697 Identity:138/697 - (19%)
Similarity:244/697 - (35%) Gaps:220/697 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 TTASNAKLL---PAVEDESNKQTKCSVFRGL---VLCLCLNLSYANVVRFPRELDRYGS-AYLVP 252
            ||..|.:..   ..|.:..::|    .|||:   :..|...:...|:.|||....:.|. ::|:.
 Worm    46 TTVDNGRRAYRNQVVVENVDRQ----AFRGIESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIA 106

  Fly   253 YVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASPIFKGACMISRFASWLSAI---WVSLQAVL 313
            |||...|..:|.:.:|.::||:..:.....: |..||.:|       ..|::.:   .:.:..::
 Worm   107 YVVCGILFAVPAIHMEFALGQYAAKSPPAAFRRMMPILEG-------VGWMTCLVGAIIGVYYMI 164

  Fly   314 ALAYIGMFASNDLPFRE---------------CAGPVKLRL-SGYLLTGT--------------- 347
            .:::|.::..|.:...:               |...||.:| |||:|..:               
 Worm   165 VISWIVLYLFNIIYATKISKCNNDWNKNRSTICYEGVKQKLCSGYMLNSSLVMTNLTRNASVHSK 229

  Fly   348 ----SGQECLQLT----------FLTPFWRNP---------LYFGLLAAGLIGLWIVVML----- 384
                .| :|...|          |.|.|...|         :...:|||..: .|::.::     
 Worm   230 MMYIDG-KCQNATNMKLAVGTEQFFTNFVVKPSTGFTDFNSINVPMLAAVAV-CWVIAIISLIRG 292

  Fly   385 ------CTHNAKILRRSIFVFGLV-GLVLLCTLTG-----WEVRNSFSRHYFPELWGFDSNLLAE 437
                  .::...:|..:|.:..:: ||.|....||     |...|.:..:.|..|:        :
 Worm   293 MKAIGKLSYYTVLLPYAIIIALMIRGLTLEGASTGLHFLFWGKPNEYGHYDFAGLY--------D 349

  Fly   438 SNIWFNALMQVLFSVNCGFGALPMITGKFLYK-----GDAVRTSVVYLCFNL--LINAIAVTLFM 495
            .::|..||||:.||::.|.|.| |..|.:..|     .||.   :|.||..|  |:...||    
 Worm   350 PDVWIAALMQMCFSLSIGQGGL-MNIGSYNKKTYNWYRDAY---LVVLCDTLMSLLGGTAV---- 406

  Fly   496 VQFDLSSNGF----QNMEELKPLTAIYDRVLNGSREGDSHLLQHLV----------PSLIYAL-- 544
                .|:.||    :|:....|..  ::.|:   :||  |.|..:|          |.|.|||  
 Worm   407 ----FSTLGFLAEQRNISISNPKG--FNEVV---QEG--HALAFIVYTEAIAQMPYPFLWYALFF 460

  Fly   545 ------------IILSAMVS--------------ITVAVYTSTRLVPRRPNYVICLIGLVVAVIS 583
                        :|:..:.|              |||...::|          ..|:|||:.   
 Worm   461 VMLFLLGISTEIVIIETVCSCLADRFHYLRQHRWITVVTVSTT----------FFLLGLVMT--- 512

  Fly   584 FAAPKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFR---------- 638
             :...|....:.|....|...........:.:.|.||..|...|:......|..|          
 Worm   513 -SDAGFYWFDLYDEYSAGVSATIGTAIMCLTVCWCYGLDNFRADIREMWEEPESRLDKYLGPGAY 576

  Fly   639 ----VWMWLWVICPAILTGILVWWCADDDQYDLLAEYLPRWAPIL-----FVLA----VIVIIA- 689
                ||.::..||..::....:|    |.:|....: ..::.|:.     ||.|    |:.:.| 
 Worm   577 VWTIVWRFVTPICCLVIMFAWIW----DKKYPFKGD-SKKYPPVFDAFGWFVAALPFFVVPVFAG 636

  Fly   690 -CVQIFRQVEYNFFGMICEASKPAKEWGPADPLARHSWKQWRSVCQD 735
             .::.|:.:.....|:..     .::..||.......|.:|:....|
 Worm   637 FAIKRFKDLNIPIRGVFM-----VQKQHPAYDRISEKWPEWKQKIGD 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 118/581 (20%)
snf-7NP_499702.2 SLC6sbd 70..598 CDD:271359 116/577 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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