DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and dat-1

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_499043.1 Gene:dat-1 / 176304 WormBaseID:WBGene00000934 Length:615 Species:Caenorhabditis elegans


Alignment Length:578 Identity:125/578 - (21%)
Similarity:214/578 - (37%) Gaps:179/578 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 NVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASPIFKG 291
            |:.|||     |      |..:|:||.:::.|.|:|:..:|:.:||:..:||..|| |..|:|||
 Worm    62 NIWRFP-----YLCFKNGGGVFLIPYSIMVLLTGVPLFYMELCLGQYYRKGAITTWGRICPLFKG 121

  Fly   292 A--CMISRFASWLSAIWVSL--QAVLA--LAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSGQ 350
            .  |:|      |:|.:|..  ..:||  |.|:....|.:||:..|.       :.|     :..
 Worm   122 IGYCVI------LTAFYVDFFYNVILAWGLHYLYTSFSFNLPWASCN-------NSY-----NSP 168

  Fly   351 ECLQLTFLTPFWRNP-----------------------LYFGLLAAGL----------------- 375
            .|.:     |.|...                       .|.|.|  ||                 
 Worm   169 ACYE-----PHWSEDGTAMCRSANQSVSAEKISAAEEYFYKGFL--GLHEANAPNSHVIRSVTDL 226

  Fly   376 --------IGLWIVVMLC---------THNAKILRRSIFVFGLVGLVLL--CTLTGWEVRNSFSR 421
                    :.|::|.::|         |....:...::|.:.::|::.:  .||.||:  |....
 Worm   227 GNVRWDIALSLFVVYLICYFSMWKGIHTSGKVVWFTALFPYVVLGILFIRGVTLPGWQ--NGIEY 289

  Fly   422 HYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLI 486
            :..|..     .:|...::|.:|..||.||:..|||.| |....:   .|......|...|...|
 Worm   290 YLRPNF-----EMLKRPSVWQDAATQVFFSLGPGFGVL-MAYSSY---NDFHNNVYVDALFTSFI 345

  Fly   487 NAIAVTLFMVQFDL-SSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPSLIYALI----- 545
            |  ..|.|:..|.: |..|:.:.:..||:.|:       ::||         |.|::.:.     
 Worm   346 N--CATSFLSGFVIFSVLGYMSCKSGKPIEAV-------AQEG---------PGLVFVVYPEALS 392

  Fly   546 ---------ILSAMVSITV----------AVYTSTR-----LVPRRPNYVICLIG--LVVAVISF 584
                     :|..::.:|:          |:.|...     |...|..:|.||..  :|:.:...
 Worm   393 TMPYAPFWSVLFFLMLMTLGLDSSFGGSEAIITGLSDEFPILKKNREVFVGCLFAFYMVIGIAMC 457

  Fly   585 AAPKFLIARVLDSRLVGTM--VVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW--- 644
            .....||...|  .:.||.  ::.|:..|.:.|.:|||.:....|::..:|......|.:.|   
 Worm   458 TEGGILIMEWL--IIYGTTWGLLIAVFCEAMVIAYIYGLRQFVHDVKEMMGFRPGNYWKFCWSCA 520

  Fly   645 --VICPAILTGILVWWCA---DDDQYDLLAEYLPRWAPILFVLAVIVIIACVQIFRQV 697
              .|..:::|...:.:.|   .|..|...|..:    .|:|.|:....|..|.|::.|
 Worm   521 APFILLSMITSNFINYQALTYQDYTYPTAANVI----GIIFALSGASFIPLVGIYKFV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 114/535 (21%)
dat-1NP_499043.1 SLC6sbd_SERT-like_u1 40..591 CDD:271405 125/578 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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