DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and Slc6a13

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001366036.1 Gene:Slc6a13 / 14412 MGIID:95629 Length:602 Species:Mus musculus


Alignment Length:651 Identity:150/651 - (23%)
Similarity:239/651 - (36%) Gaps:194/651 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 TASNAKLLPA------VEDE--------SNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRY- 245
            |.||.:..|.      ||::        :||........|.::.|      .||.|||     | 
Mouse     8 TTSNGETKPVCPAMEKVEEDGTLEREHWNNKMEFVLSVAGEIIGL------GNVWRFP-----YL 61

  Fly   246 -----GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASPIFKGACMISR-FASWLS 303
                 |.|:.:||::.||..|:|:..||.::||:..||....| |..|||:|....|: ..|.|:
Mouse    62 CYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRRICPIFEGIGYASQMIVSLLN 126

  Fly   304 AIWVSLQAVLALAYIGMFAS--NDLPFRECA------GPVKLRLSGYLLTGTSGQECLQLTFLTP 360
            ..::   .|||.|...:|:|  .|||:..|:      ..|:.:.:...:..||..   ..:.:..
Mouse   127 VYYI---VVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKANDSMNVTSEN---ATSPVIE 185

  Fly   361 FWRN---PLYFGLLAAG---------LIGLWIVVMLCT-HNAKILRRSIF---VFGLVGLVLL-- 407
            ||..   .|..|:...|         |:..||:...|. ...|...:.::   .|..:.||:|  
Mouse   186 FWERRVLKLSDGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLI 250

  Fly   408 --CTLTGWEVRNSFSRHYFP---ELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFL 467
              .||.|  .......:.:|   .||        :..:|.:|..|:.||.....|.|..:.....
Mouse   251 RGVTLPG--AAQGIQFYLYPNITRLW--------DPQVWMDAGTQIFFSFAICLGCLTALGSYNK 305

  Fly   468 YKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAI-----------YDR 520
            |..:..|..:. ||   ::|  :.|.||..|.: |..||.:.|:..|::.:           |.|
Mouse   306 YHNNCYRDCIA-LC---ILN--SSTSFMAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPR 364

  Fly   521 -------------------VLNGSREGDSHLLQHLVPSLIYALIILSAMVSITVAVYTSTRLVPR 566
                               ||.|.   ||..:  .|.||:.||:.:...|.             |
Mouse   365 AVVMLPFSPLWACCFFFMVVLLGL---DSQFV--CVESLVTALVDMYPRVF-------------R 411

  Fly   567 RPNYVICLIGLVVAVISFAAPKFLIA-------RVLDSRLV-GTMVVTALVFELIAITWIYGAKN 623
            :.|....|| |:|:||||.....::.       ::.|.... |..::...:||.:.:.|:|||..
Mouse   412 KKNRREVLI-LIVSVISFFIGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGAGR 475

  Fly   624 IYTDLEFSIGRPIFRVW-----MWLW---VICPAILTGILV--------------WWCADDDQYD 666
            .|.::|..||   ::.|     .||:   .:|.|.....|:              ||      .|
Mouse   476 FYDNIEDMIG---YKPWPLIKYCWLFFTPAVCLATFLFSLIKYTPLTYNKKYTYPWW------GD 531

  Fly   667 LLAEYLPRWAPILFVLAVIVIIACVQIFR------QVEYNFFGMICEASK-PAKE----WGPADP 720
            .|.     |   |..|:.::.|....|::      .:......::|.|.. |.|.    ..||.|
Mouse   532 ALG-----W---LLALSSMICIPAWSIYKLRTLKGPLRERLRQLVCPAEDLPQKNQPEPTAPATP 588

  Fly   721 L 721
            :
Mouse   589 M 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 127/539 (24%)
Slc6a13NP_001366036.1 SLC5-6-like_sbd 32..575 CDD:382020 139/611 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.