DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a3

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:647 Identity:133/647 - (20%)
Similarity:229/647 - (35%) Gaps:174/647 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 TTASNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRY------GSAYLVPY 253
            :|..|....|....|....:|...|...|:...::|  |||.|||     |      |.|:||||
Mouse    45 STLINPPQTPVEVQERETWSKKIDFLLSVIGFAVDL--ANVWRFP-----YLCYKNGGGAFLVPY 102

  Fly   254 VVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVSLQAVLALAYI 318
            ::.:.:.|:|:..:|:::|||..:|||..|:..|:.||........|:....:.::....||.|.
Mouse   103 LLFMVIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYF 167

  Fly   319 GMFASNDLPFREC---------------------------------------------------A 332
            ....:.|||:..|                                                   .
Mouse   168 FSSFTMDLPWIHCNNTWNSPNCSDAHSSNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDDL 232

  Fly   333 GPVKLRLSGYLLTGTSGQECLQLTFLTPFWRNPLYF----GLLAAGLIGLWIVVML--CTHNAKI 391
            ||.:.:|:.          ||.|..:.      |||    |:..:|.: :||...:  ....|.:
Mouse   233 GPPRWQLTA----------CLVLVIVL------LYFSLWKGVKTSGKV-VWITATMPYVVLTALL 280

  Fly   392 LRRSIFVFGLVGLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGF 456
            ||         |:.|...:.|  :|...|..::         .|.|:::|.:|..||.||:..||
Mouse   281 LR---------GVTLPGAMDG--IRAYLSVDFY---------RLCEASVWIDAATQVCFSLGVGF 325

  Fly   457 GALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAIYDR 520
            |.|...:....:..:..|.:::....|      ::|.|...|.: |..|:...:...|:..:   
Mouse   326 GVLIAFSSYNKFTNNCYRDAIITTSIN------SLTSFSSGFVVFSFLGYMAQKHNVPIRDV--- 381

  Fly   521 VLNGSREGDSHLLQHLVPSLIYALIILSA--------------------MVSITVAVYTSTRLVP 565
                :.:|.. |:..:.|..|..|.:.||                    |.|:...:....:|:.
Mouse   382 ----ATDGPG-LIFIIYPEAIATLPLSSAWAAVFFLMLLTLGIDSAMGGMESVITGLVDEFQLLH 441

  Fly   566 RRPNYVICLIGLVVAVISFAAPKFLIAR-------VLDSRLVGTMVVTALVFELIAITWIYGAKN 623
            |...  :..:|:|:|  :|....|.:..       :||....||.::..::.|.|.:.|.||.:.
Mouse   442 RHRE--LFTLGIVLA--TFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVQQ 502

  Fly   624 IYTDLEFSIGRPIFRVWMWLW-VICPAILTGILVWWCADDDQYDLLAEYLPRWAPILFVLAVIVI 687
            ...|::...|:.....|...| ::.|..|..::|............|...|.||..|..:.....
Mouse   503 FSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHYGAYIFPDWANALGWIIATSS 567

  Fly   688 IACVQIFRQVEY-----NFFGMICEASKPAKEWGPADPLARHSWKQWRSVCQDTGRRDFTLR 744
            :|.|.|:...::     :|...:..|..|.|:               |.:......|.||||
Mouse   568 MAMVPIYATYKFCSLPGSFREKLAYAITPEKD---------------RQLVDRGEVRQFTLR 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 110/531 (21%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 126/629 (20%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 4/28 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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