DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a9

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_006238687.1 Gene:Slc6a9 / 116509 RGDID:621243 Length:638 Species:Rattus norvegicus


Alignment Length:747 Identity:169/747 - (22%)
Similarity:279/747 - (37%) Gaps:240/747 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 ASAHNITTASNAKLLPAVEDESNKQTKCSVFRG----LVLCLCLNLSYA----NVVRFPRELDRY 245
            |.||.....|:.:...||..|:.|:.: ::.||    .:..:..::.||    ||.|||....|.
  Rat     2 AVAHGPVATSSPEQNGAVPSEATKKDQ-NLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRN 65

  Fly   246 -GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGA----CMISRFASWLSAI 305
             |.|::.||.::|...|:|:..:|:|.|||..||....||.||:|||.    .::|.:      |
  Rat    66 GGGAFMFPYFIMLVFCGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTY------I 124

  Fly   306 WVSLQAVLALAYIGMFAS--NDLPFR---------ECAG------------PVKL-----RLSGY 342
            .:....|:.:|:...|:|  :.||:.         :|||            |..|     .|..|
  Rat   125 GIYYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTPDCAGVLDASNLTNGSRPTALSGNLSHLFNY 189

  Fly   343 LLTGTSGQECLQLTFLTPFWRNPLY----------FGLLAAGLIGL----WIVVMLC-THNAKIL 392
            .|..||..|        .:||  ||          ||.:...|:|.    |:||.|| ....|..
  Rat   190 TLQRTSPSE--------EYWR--LYVLKLSDDIGDFGEVRLPLLGCLGVSWVVVFLCLIRGVKSS 244

  Fly   393 RRSIFVFGLVGLVLLCTL--TGWEVRNSFS--RHYFPELWGFDSNLLAESNIWFNALMQVLFSVN 453
            .:.::.......|:|..|  .|..:..:|:  .:|....|    :.:.|:.:|.:|..|:.:|:.
  Rat   245 GKVVYFTATFPYVVLTILFVRGVTLEGAFTGIMYYLTPKW----DKILEAKVWGDAASQIFYSLG 305

  Fly   454 CGFGALPMITGKFLYKGDAVRTSVV-------------YLCFNLL-------------------- 485
            |.:|.|..:.....:..:..|.||:             ::.|::|                    
  Rat   306 CAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPG 370

  Fly   486 --------------INAIAVTLFMVQFDLSSNG--FQNMEELKPLTAIYDRVLNGSREGDSHLLQ 534
                          |:.:...||.....|...|  |..:|.|  :|||.|.|      |:..:||
  Rat   371 LAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETL--VTAIVDEV------GNEWILQ 427

  Fly   535 HLVPSLIYALIILSAMVSITVAVYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFLIARVLDSRL 599
            .            ...|::.|||             ...|:|  :.:.|.|...:|:  ::|:..
  Rat   428 K------------KTYVTLGVAV-------------AGFLLG--IPLTSQAGIYWLL--LMDNYA 463

  Fly   600 VGTMVVTALVFELIAITWIYGAKNIYTDLEFSIG--RPIFRVWMWLWVICPAILTGILVWWCADD 662
            ....:|.......::|.:|||.:|.:.|::..:|  .|:|....|.:| .|.|:..||::...  
  Rat   464 ASFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFV-SPTIIFFILIFTVI-- 525

  Fly   663 DQYDLLA----EYLPRWAPILFVLAVIVIIACVQIFRQVEYNFFGMIC------------EASKP 711
             ||..:.    :| |.||..:..|..:..:.|:.:     |..| .:|            .|:||
  Rat   526 -QYRPITYNHYQY-PGWAVAIGFLMALSSVICIPL-----YALF-QLCRTDGDTLLQRLKNATKP 582

  Fly   712 AKEWGPADPLARHSWKQWRSVCQDTGRRDFTLRRRGTRDYTHSIKKGQYSSATKYGVQNGGQTQT 776
            :::||||  |..|                               :.|:|:..|....::|.:.| 
  Rat   583 SRDWGPA--LLEH-------------------------------RTGRYAPTTTPSPEDGFEVQ- 613

  Fly   777 PMHQQHWKSSTP---GNSSPNYSGSMFGDSAI 805
            |:|..  |:..|   .|.|     |...||.|
  Rat   614 PLHPD--KAQIPIVGSNGS-----SRLQDSRI 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 126/550 (23%)
Slc6a9XP_006238687.1 SLC6sbd_GlyT1 16..599 CDD:212067 151/684 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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