DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a5

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_006540608.1 Gene:Slc6a5 / 104245 MGIID:105090 Length:831 Species:Mus musculus


Alignment Length:819 Identity:179/819 - (21%)
Similarity:294/819 - (35%) Gaps:254/819 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 ETDL----PTVTPSP-----------QTTRSCISTVSSVVDSGGGRTTATSGR--ISSSGIVTLS 160
            |.||    ||.|..|           ||.:|..:.......||.|....:|.|  .:|:.:..||
Mouse    68 EQDLPAEAPTATVQPPRVPRSASTGAQTFQSADARACEAQQSGVGFCNLSSPRAQATSAALRDLS 132

  Fly   161 DSNNTLSEIQGG--------------YHDMDHDAVSKNFSISASA--HNITTASN---------- 199
            :.::..:....|              ....:.||   |.|:....  ||.|.|..          
Mouse   133 EGHSAQANPPSGPAGAGNALHCKIPALRGPEEDA---NVSVGKGTLEHNNTPAVGWVNMSQSTVV 194

  Fly   200 ------AKLLPA-------VEDESNKQTKCSVFRG-------LVLCLCLNLSYA----NVVRFP- 239
                  |.:||.       .|||...:.|.   ||       .:|.:   :.||    ||.||| 
Mouse   195 LGTDGIASVLPGSVATTTIPEDEQGDENKA---RGNWSSKLDFILSM---VGYAVGLGNVWRFPY 253

  Fly   240 RELDRYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSA 304
            ......|.|:|:||:::|.|.|||:..||:|:|||..||....|:|.|..:|..:.....|.|.|
Mouse   254 LAFQNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIA 318

  Fly   305 IWVSLQAVLALAYIGMFAS--NDLPFRECAGP------------------------VKLRLSGYL 343
            |:.::.....|.|  :|||  :.||:..|..|                        ::::.|.:.
Mouse   319 IYYNVIICYTLFY--LFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFC 381

  Fly   344 LTG-----------------TSGQECLQLTFLTPF-----------WRNPLYFGLLAAGLIGLWI 380
            :|.                 .||.|.....|:...           |  ||.|.|..|     |:
Mouse   382 MTAYPNLTMVNFTSQTNKTFVSGSEEYFKYFVLKISAGIEYPGEIRW--PLAFCLFLA-----WV 439

  Fly   381 VVMLCTHNAKILRRS------IFVFGLVGLVLL----CTLTG-----WEVRNSFSRHYFPELWGF 430
            :|....  ||.::.|      ...|..|.||:|    .||.|     |        ::....|  
Mouse   440 IVYASL--AKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIW--------YFITPKW-- 492

  Fly   431 DSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFM 495
              ..|.::.:|.:|..|:.||::..:|.|..::....:..:..|.:::..|.|...:..|..:..
Mouse   493 --EKLTDATVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIF 555

  Fly   496 VQFDLSSN----GFQNMEELKPLTA--IYDRVLNGSREGDSHLLQHLVPSLIYALIILSAMVSIT 554
            ......:|    ..:|:.:..|..|  :|...|.           .|..|..:|:|....::::.
Mouse   556 SVIGFMANERKVNIENVADQGPGIAFVVYPEALT-----------RLPLSPFWAIIFFLMLLTLG 609

  Fly   555 VAVYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFL----------------------------- 590
            :....:|             |..:|..||...||:|                             
Mouse   610 LDTMFAT-------------IETIVTSISDEFPKYLRTHKPVFTLGCCICFFIMGFPMITQGGIY 661

  Fly   591 IARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIG-RP-IFRVWMWLWV-ICPAILT 652
            :.:::|:......:|...:|||:.|:::||.:....|:|..|| :| ||  |...|. :.|.|||
Mouse   662 MFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFKPNIF--WKVCWAFVTPTILT 724

  Fly   653 GILVWWCADDDQYDLL--AEY-LPRWAPILFVLAVIVIIACVQIFRQVEY---------NFFGMI 705
            .||   |....|::.:  ..| .|.|:.:|..|    ::||..|:..:.:         .|...:
Mouse   725 FIL---CFSFYQWEPMTYGSYRYPNWSMVLGWL----MLACSVIWIPIMFVIKMYLAPGRFIERL 782

  Fly   706 CEASKPAKEWGPADPLARHSWKQWRSVCQDTGRRDFTLR 744
            .....|..:|||.  ||:|..::::::....|.....|:
Mouse   783 KLVCSPQPDWGPF--LAQHRGERYKNMIDPLGTSSLGLK 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 125/558 (22%)
Slc6a5XP_006540608.1 SLC6sbd_GlyT2 225..821 CDD:271389 145/656 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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