DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a8

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_598748.1 Gene:Slc6a8 / 102857 MGIID:2147834 Length:640 Species:Mus musculus


Alignment Length:558 Identity:119/558 - (21%)
Similarity:199/558 - (35%) Gaps:179/558 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAA 280
            ::.|:...:...||.|||     |      |..:|:|||::..:.|:|:..||||:|||:..|:.
Mouse    62 IMSCVGFAVGLGNVWRFP-----YLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSI 121

  Fly   281 HTWRASPIFKGACMISRFASWLSAIWVSLQAVLALA----YIGMFASNDLP-------------- 327
            :.|...|:|||.    .:||.:...:.:...::.||    |:....:..||              
Mouse   122 NVWNICPLFKGL----GYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDCV 182

  Fly   328 --FR--ECAGPVKLRLSGYLLTGTSGQECLQL----TFLTPFWRNP---LYFGLLAAG------- 374
              ||  :||......|:           |.||    :.:..||.|.   |..||...|       
Mouse   183 EIFRHEDCANASLANLT-----------CDQLADRRSPVIEFWENKVLRLSTGLEVPGALNWEVT 236

  Fly   375 --LIGLWIVVMLCT-----HNAKILRRS------IFVFGLV-GLVLLCTLTGWEVRNSFSRHYFP 425
              |:..|::|..|.     ...||:..:      :.|..|| |::|...|.|       ..:|..
Mouse   237 LCLLACWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALDG-------IIYYLK 294

  Fly   426 ELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIA 490
            ..|    :.|....:|.:|..|:.||...|.|||..:.....:..:..:.:::....|      :
Mouse   295 PDW----SKLGSPQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALIN------S 349

  Fly   491 VTLFMVQFDL-SSNGFQNMEELKPLTAI-----------YDRVLNGSREGDSHLLQHLVP---SL 540
            .|.|...|.: |..||...|:...::.:           |.|.:.         |..:.|   :|
Mouse   350 GTSFFAGFVVFSILGFMATEQGVHISKVAESGPGLAFIAYPRAVT---------LMPVAPLWAAL 405

  Fly   541 IYALIILSAMVSITVAVYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFL-------IARVLDSR 598
            .:.:::|..:.|..|.|          ..::..|:.|:.|...|...:.:       :..|:|..
Mouse   406 FFFMLLLLGLDSQFVGV----------EGFITGLLDLLPASYYFRFQREISVALCCALCFVIDLS 460

  Fly   599 LV----------------------GTMVVTALVFELIAITWIYGAKNIYTDLEFSIG-RPIFRVW 640
            :|                      ||.::....:|.:.:.|:|||.....|:...|| ||.  .|
Mouse   461 MVTDVSGGKGGMYVFQLFDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPC--PW 523

  Fly   641 M-WLW-VICPAILTGILV------------------WW 658
            | |.| ...|.:..||.:                  ||
Mouse   524 MKWCWSFFTPLVCMGIFIFNIVYYEPLVYNNTYVYPWW 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 119/558 (21%)
Slc6a8NP_598748.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SLC6sbd_CT1 52..626 CDD:271397 119/558 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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