DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a6

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:593 Identity:134/593 - (22%)
Similarity:219/593 - (36%) Gaps:170/593 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASP 287
            :...||.|||     |      |.|:|:||.:.||..|||:..||:.:|||..:|....| :..|
 Frog    59 IGLGNVWRFP-----YLCYKNGGGAFLIPYFIFLFGGGLPVFFLEVVLGQFTSEGGITCWEKICP 118

  Fly   288 IFKGACMISRFASWLSAIWVSLQ-----AVLALAYIGMFAS--NDLPFRECAGPVKLRLSGYLLT 345
            :|.|       ..:.|.:.|||.     .:||.....:|.|  ..||:..|..|           
 Frog   119 VFTG-------IGYASIVIVSLLNVYYIVILAWGVYYLFQSFQGQLPWALCHQP----------- 165

  Fly   346 GTSGQECLQLTF------------------LTPFWRN---PLYFGL---------LAAGLIGLWI 380
             .:.:.|::.||                  :|.||.:   .|..|:         ||..|:..|:
 Frog   166 -WNTESCVEDTFRKNWTMWMSMNSTNFTSPVTEFWEHKVLSLSKGIDDVGVLKWDLALCLLLTWV 229

  Fly   381 VVMLC-----THNAKILRRSI---FVFGLVGLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAE 437
            :...|     ....|::..:.   |:..||.|:...||.|  .......:.:|     |...||:
 Frog   230 ICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPG--AAEGIKFYLYP-----DITRLAD 287

  Fly   438 SNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFN---LLINAIA---VTLFMV 496
            ..:|.:|..|:.||.....||:..:.....||.:..|..::..|.|   ..::..|   |..||.
 Frog   288 PQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVSGFAIFSVLGFMA 352

  Fly   497 Q------FDLSSNG-------FQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPSLIYALIILS 548
            |      .|::.:|       :.....:.||.:.:                   ..|.:.:::|.
 Frog   353 QEQGVDIADVAESGPGLAFIAYPKAVSMMPLPSFW-------------------AILFFIMLLLL 398

  Fly   549 AMVSITVAVYTS-TRLVPRRPNY------------VICLIGLVVAVISFAAPKFLIARVLDSRLV 600
            .:.|..|.|... |.||...|::            |:|.:..::.:.........:.::.|....
 Frog   399 GLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAVVCFLSYLLGLTMVTEGGMYVFQLFDYYAA 463

  Fly   601 -GTMVVTALVFELIAITWIYGAKNIYTDLEFSIG-RPIFRVWM-WLW-VICPAILTGILVWWCAD 661
             |..::....||.:|:.|:|||...|.::|..|| :|  ..|| |.| ||.|.:.....::    
 Frog   464 SGVCLLWVAFFECVAVAWVYGADKFYDNIEDMIGYKP--GPWMKWSWTVITPLLCVACFIF---- 522

  Fly   662 DDQYDLLAEY----------LPRWAPIL-FVLAV--IVIIACVQIFRQVEYNFFGMICE------ 707
                 .||:|          .|.||..| :|||:  ::.|..|.:|..|..:  |.:.|      
 Frog   523 -----SLAKYTPLTYNKYYVYPDWAIGLGWVLALSSMICIPLVVVFHIVRSD--GSLIERIKAVT 580

  Fly   708 ASKPAKEW 715
            |.:....|
 Frog   581 APREVNRW 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 116/516 (22%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 132/585 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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