DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a9

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_004914027.1 Gene:slc6a9 / 100492204 XenbaseID:XB-GENE-948182 Length:638 Species:Xenopus tropicalis


Alignment Length:606 Identity:144/606 - (23%)
Similarity:249/606 - (41%) Gaps:148/606 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 NLSYA----NVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPI 288
            ::.||    ||.|||....|. |.|::.||.::|...|:|:..:|:|.|||..||....||.|||
 Frog    40 SVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLVFCGIPLFFMELSFGQFASQGCLGVWRVSPI 104

  Fly   289 FKGA----CMISRFASWLSAIWVSLQAVLALAYIGMFASND--LPF---------RECAGPVKLR 338
            |||.    .::|.:      |.:....|:.:|:...|||.:  ||:         ..|||.:...
 Frog   105 FKGVGYGMMVVSTY------IGIYYNVVICIAFYYFFASMNRILPWTYCNNLWNTENCAGVLSPN 163

  Fly   339 LSG--------YLLTGTSG-QECLQLTFLTP---FWRNPLY--------FGLLAAGLIGL----W 379
            .|.        .||..|.| .:.|:.|  :|   :||..:.        ||.:...|:|.    |
 Frog   164 SSATFNISSQHSLLNLTMGLNQTLKRT--SPSEEYWRRHVLNISGDIGDFGEVRLPLLGCLGVSW 226

  Fly   380 IVVMLC-THNAKILRRSIF---VFGLVGLVLL----CTLTGWEVRNSFSRHYFPELWGFDSNLLA 436
            :||.|| ....|...:.::   .|..|.|.:|    .||.|  ..|....:..|: |    :.:.
 Frog   227 LVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFIRGITLDG--AINGILYYLTPQ-W----DKIL 284

  Fly   437 ESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVV-------------YLCFNLLINA 488
            .:.:|.:|..|:.:|:.|.:|.|..:.....:..:..|.|::             ::.|::| ..
 Frog   285 HAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSIL-GF 348

  Fly   489 IAVTLFMVQFDLSSNG-------FQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPSLIYALII 546
            :|..|.:...:::.:|       :.....|.|::.::..:                  ..:.||:
 Frog   349 MATHLGVDVSEVADHGPGLAFVAYPEALTLLPISPLWSIL------------------FFFMLIL 395

  Fly   547 LSAMVSITVAVYTSTRLVPR-RPNYVI---CLIGLVVAVISF---------AAPKFLIARVLDSR 598
            |.......:.....|.:|.. ..:::|   .|:.|.||:|.|         |...:|:  ::|:.
 Frog   396 LGLGTQFCLLETLVTAIVDEIGSDWIIRWKTLVTLGVAIIGFLLGIPLTTQAGIYWLL--LMDNY 458

  Fly   599 LVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIG--RPIFRVWMWLWVICPAILTGILVWWCAD 661
            .....:|.......||:.:|||.:|.:.|:|..:|  .|:|..:.|.: ..|||:..||::... 
 Frog   459 AASFSLVIISCIMCIAVMYIYGHRNYFKDIEMMLGFPPPLFFQFCWRF-FSPAIIFFILIFTVI- 521

  Fly   662 DDQYDLLA--EYL-PRWAPILFVLAVIVIIACV------QIFRQVEYNFFGMICEASKPAKEWGP 717
              ||..:.  :|: |.||..:..|..:..:.|:      :::|...:.|...:..|.||:|:|||
 Frog   522 --QYRPIKYNDYVYPDWALTIGFLMALSSVICIPLYAVFRVWRSEGHTFLQRLKNAVKPSKDWGP 584

  Fly   718 ADPLARHSWKQWRSVCQDTGR 738
            |  |..|.          |||
 Frog   585 A--LLEHR----------TGR 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 121/516 (23%)
slc6a9XP_004914027.1 SLC6sbd_GlyT1 11..595 CDD:212067 144/606 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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