DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and si:ch211-132b12.1

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001076533.1 Gene:si:ch211-132b12.1 / 100034467 ZFINID:ZDB-GENE-050420-315 Length:586 Species:Danio rerio


Alignment Length:612 Identity:129/612 - (21%)
Similarity:220/612 - (35%) Gaps:182/612 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 NVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTW-RASPIFKGACMIS 296
            ||.|||....:| |.|:|:||:|.:...|:|:.|||:::||:..||....| |..|:.:|.....
Zfish    33 NVWRFPYLCYKYGGGAFLIPYLVFVVTCGVPLFLLEMAMGQYTQQGGVTCWHRLCPLAEGIGYGG 97

  Fly   297 RFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGP------VKLRLSGYLLTGTSGQECLQL 355
            :.....|.::..:....||.|:.....:.||:..|...      :.|......:..||      |
Zfish    98 QLILLYSCMYYIVILAWALFYLIFSFKSQLPWATCDNTWNTDDCINLVTKNLTINRTS------L 156

  Fly   356 TFLTP----FWRN---PLYFGLLAAG---------LIGLWIVVMLCT-----HNAKILRRSI--- 396
            ...||    ||..   .|..|:...|         ||.:||:...|.     ...|::..:.   
Zfish   157 INSTPAATEFWERRVLSLSGGIEDIGKINWEILLCLIAMWIICYFCVWKGVKSTGKVVYFTATFP 221

  Fly   397 FVFGLVGLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPM 461
            :|..||.|:...||.|  .......:.:||     ...||:..:|..|..|:|||.:...|::.:
Zfish   222 YVMLLVLLIRGLTLPG--ALQGVVFYLYPE-----PARLADPQVWLEAGTQILFSYSVSVGSITV 279

  Fly   462 ITGKFLYKGDAVRTSVVYLCFNL-LINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAIYDRVLNG 524
            :.....|..:..|.     |..| |:|  :||.|:..|.: :..||...|:..|:..:       
Zfish   280 LASYNKYHNNCYRD-----CLGLCLLN--SVTSFVAGFAVFTVLGFMAQEQGVPIEEV------- 330

  Fly   525 SREGDSHLLQHLVPSLIYALIILSAMVSITVAVYTSTRLVPRRPNYVIC------LIGLVVAVIS 583
            :..|         |.|.:            :|...:..::|....:.:|      |:||....:|
Zfish   331 AESG---------PGLAF------------IAYPQAVAMMPFPQLWAVCFFIMIILLGLDTQFVS 374

  Fly   584 FAAPKFLIARVLDSRLV--------------------------------------------GTMV 604
            ..|   ::..|:|...|                                            ||.:
Zfish   375 MEA---VVTSVMDMFPVVLRREGRREILLLFFCLTCFFGQFIMVTEGGMYVFQLFDYYACNGTCL 436

  Fly   605 VTALVFELIAITWIYGAKNIYTDLE-FSIGRPIFRVWMWLW-VICPAILTGILVWWCADDDQYDL 667
            :...|||.:.:.||:||..::..:| .:..||.: ::|..| .:.|  |..::.:.|:       
Zfish   437 LFLSVFESLTMGWIFGADRLFDIIEDMTKSRPNY-IFMLCWKYLTP--LVSLVCFVCS------- 491

  Fly   668 LAEY----------LPRWAPI---LFVLAVIVIIACVQIFRQVEYNFFGMICEASKPAKEWGPAD 719
            :.||          .|.||.:   |..|:.||::....:         |.:|......|:     
Zfish   492 MVEYQPLTFNRWYVFPDWAYVLGWLLALSSIVLVPGWAL---------GRLCSEKGSLKQ----- 542

  Fly   720 PLARHSWKQWRSVCQDTGRRDFTLRRR 746
                    :||.:|........|.::|
Zfish   543 --------RWRRLCSADKDLPLTCKQR 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 111/510 (22%)
si:ch211-132b12.1NP_001076533.1 SLC6sbd-TauT-like 11..549 CDD:271387 126/598 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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