DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and si:ch211-132b12.3

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001076419.1 Gene:si:ch211-132b12.3 / 100002232 ZFINID:ZDB-GENE-050419-161 Length:577 Species:Danio rerio


Alignment Length:553 Identity:128/553 - (23%)
Similarity:206/553 - (37%) Gaps:110/553 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 NVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-ASPIFKGACMIS 296
            ||.|||....|. |..:|:||:|.:...|:|:.|||..:|||..:|....|. ..|:.:|.....
Zfish    33 NVWRFPYLCYRNGGGVFLIPYLVFVMTCGVPLFLLETVMGQFTHEGGITCWHLLCPLAQGVGYAG 97

  Fly   297 RFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVK----LRLSGYLLTGTSGQECLQLTF 357
            :.....|.::.::....||.|:....|:.||:..|.....    :.|:...||.....:....:.
Zfish    98 QLIELYSCMYFTIILAWALFYLIFSFSSQLPWASCDNIWNTDNCVNLAAGNLTFNRTTQINSTSA 162

  Fly   358 LTPFWRN---PLYFGL---------LAAGLIGLWIVVMLC-----THNAKILRRSI---FVFGLV 402
            .|.||..   .|..|:         :|..|..:||:...|     ....|::..:.   :|..||
Zfish   163 ATEFWERRVLSLSGGIEEIGKINWEIALCLFVMWIICYFCIWKGVKSTGKVVYFTATFPYVMLLV 227

  Fly   403 GLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFL 467
            .|:...||.|  .......:.:||     ...||:..:|..|..||.||.:...|.|..:.....
Zfish   228 LLIRGLTLPG--ALQGVVFYLYPE-----PAHLADPQVWMEAGTQVFFSYSLCSGILIALGSYNQ 285

  Fly   468 YKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAIYDRVLNGSREGDSH 531
            |..:..|.| .:||   |:|  :.|.|:..|.: |..||....:..|:..:.:     |..|.:.
Zfish   286 YSNNCYRDS-FWLC---LLN--SGTSFVAGFAVFSVLGFMAHVQGVPVEEVAE-----SGPGLAF 339

  Fly   532 L----------LQHLVPSLIYALIIL----SAMVSITVAVYTSTRLVP-------RRPNYVI--- 572
            :          ...|.....:.:|||    |..|::...|.:.|.|.|       ||..:|:   
Zfish   340 IAYPQAVAMMPFPQLWAVCFFIMIILLGLDSQFVAMECVVTSVTDLFPEVLRRAGRRELFVLLLC 404

  Fly   573 --CLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDL-EFSIGR 634
              |..|.::.|.......|.:.....|.  |...:...|||.:.|.||:||:.::..: :.:..|
Zfish   405 LTCFFGQLIMVTEGGMYVFQLFDNYASN--GACFLFLSVFESLTIGWIFGAEKMFDIIKDMTESR 467

  Fly   635 PIFRVWMWL-W-VICPAI-LTGILV------------WWCADDDQYDLLAEYLPRWAPILFVLAV 684
            |.:  |..| | .:.|.: ||..:.            |:            ..|.||.:|..|..
Zfish   468 PNY--WFMLCWKYLTPLVSLTSFVYSMVRYTPLTYNRWY------------VYPDWAHVLGWLLA 518

  Fly   685 IVIIACVQIFRQVEYNFFGMICEASKPAKE-WG 716
            :..|..|..:.      .|.:|......|: ||
Zfish   519 LSSILLVPGWA------LGQMCTGKGSLKQRWG 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 116/493 (24%)
si:ch211-132b12.3NP_001076419.1 SLC6sbd-TauT-like 11..550 CDD:271387 128/553 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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