DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and Cdhr1

DIOPT Version :10

Sequence 1:NP_648973.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:NP_446024.1 Gene:Cdhr1 / 93662 RGDID:620420 Length:859 Species:Rattus norvegicus


Alignment Length:724 Identity:246/724 - (33%)
Similarity:351/724 - (48%) Gaps:89/724 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLPLFLSLTAGQLVNQPPQFVPG-----TGDMSRFSLSENTPVGSPVFQLKGTDPEGGRLKYSIS 64
            ||.::|:     ..|..|.|...     .|:|:.|||.|:|||||.|:.|.||||||..:.|.||
  Rat    13 LLCIYLA-----QANFAPHFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGTDPEGDPISYHIS 72

  Fly    65 -----GPVFSVDRETGVVRLRQELDRETQDTVEVIISITDEGIYGTEPNTVSQRRVIPVRDYNDN 124
                 ..|||||...|.:.|.:|||||.:|.:|.||||:| |:     |.|:::.||.|.|.||.
  Rat    73 FDPSTRSVFSVDPNFGNITLVEELDREREDEIEAIISISD-GL-----NLVAEKVVIVVTDANDE 131

  Fly   125 QPTFLGRPYTASVSESLPVGSELSVEPPIVVVDRDEGINSEVQ--MKCLEENDICDIFEVRAVKI 187
            .|.||..||...|.|:.|.||.:.   .:...|:|.|....|.  ::.|..:..         .:
  Rat   132 APRFLQEPYNILVPENTPAGSSIF---KVQAEDKDTGSGGSVTYFLQSLHSSKF---------TV 184

  Fly   188 SDGNYTARVALKQQLDFESRPSYILTISASDS-----ALDNRLSSLATISINVIDIQDQPPIFTN 247
            ...:...|:.....||:|...::.:|:.|.|.     ..|...|:..|::|||.|:||..|||..
  Rat   185 DRHSGVLRLQAGATLDYEKSRAHFITVVAKDGGGRLRGADVVFSATTTVTINVEDVQDTAPIFVG 249

  Fly   248 APYSATVPENTPAGVSILTVKAVDGDVGIPREIFLSLEDEPFGHFELVPFGDPRDGTAVLQTTSE 312
            .||...|.|:|..|..:|||.|:|||.|.|..|...|.:|..|.||:   .:.....:|||:.::
  Rat   250 TPYYGYVYEDTLPGSEVLTVVAIDGDRGKPNHILYRLLNESDGLFEI---NETSGAISVLQSPAQ 311

  Fly   313 PLDRENAEILQNGGVYVFSIRATELIDGAIPAEHSLTRVTIVVTDVDDHQPTF---SGPH--FNV 372
             |.||         ||...::.||:.....||..|...|.|.:.|:::|.|||   |||.  |.:
  Rat   312 -LRRE---------VYELHVQVTEVNSSGSPAAQSTVPVIIRIVDLNNHPPTFYGESGPQNKFEL 366

  Fly   373 SITENLANGMPLPGLSIFVDDRDMGENSRYELSLRDVFNAARVFEVSPTESQGRTPVVVKVLNAS 437
            |:.|:...|..|.||.|.|:|.|.|.|:::.|.|   .....:|.|.|........|.:.|.|::
  Rat   367 SMFEHPPQGEILRGLKITVNDSDQGANAKFNLRL---VGPGGIFRVVPQTVLNEAQVTIIVENSA 428

  Fly   438 RLDYDVVDPDLRKFEFDLVA-SVKGVEKAKTRVE--IHLLDANDNAPVFDQGTYRFTAAENLPVD 499
            .:|::    ..:...|.|:| .|...||..:..:  |.|||.|||.|.|....|.....||:|..
  Rat   429 AIDFE----KSKSLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIARIPENVPGG 489

  Fly   500 AIIGHVKATDLDSGEFGHVRYVLKGFGADNFYVNPETGGVYLLKP---LDYEKQSSYSLTVVAID 561
            :.:..|.|.|.|:|.:|.|:|.:.|.|:|.|.::|.||.:| .:|   ||.|..|.|:..|.|.|
  Rat   490 SNVVAVTAVDPDTGPWGKVQYSIYGTGSDLFLIHPSTGLIY-TQPWASLDAEGTSRYNFYVKAED 553

  Fly   562 GGQREANANLFVGVTDVNDNHPNFESKEYSRTIREGAALFEPQFFVRAHDADGPSQGNGRVKYSI 626
            ...|.:.|.:||.:.||||::|.|......:|:..|..|     .:.|.|.|. .:.|..|.|||
  Rat   554 MDGRYSLAEVFVTLLDVNDHYPQFVQSVQEKTMVLGTPL-----KIEATDQDA-EEPNNLVDYSI 612

  Fly   627 VSENSIAGNVFRIEPDTGEIVIQKAARSMD-----TERGEY--ELVVSATDFGIPPLSNTTRVLV 684
            .....:  |||.|:..||||.::.:.||::     |..|||  .|.|.|.|.|.|..|.|  .|:
  Rat   613 TRAEPV--NVFDIDAHTGEIRLKNSIRSLEALHNITPSGEYSWSLQVQAKDRGSPSFSTT--ALL 673

  Fly   685 RVGISGNQR 693
            ::.|:..:|
  Rat   674 KIDITDTER 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_648973.1 Cadherin_repeat 33..124 CDD:206637 47/95 (49%)
Cadherin_repeat 132..240 CDD:206637 26/114 (23%)
Cadherin_repeat 249..361 CDD:206637 37/111 (33%)
Cadherin_repeat 487..581 CDD:206637 36/96 (38%)
Cadherin_repeat 589..686 CDD:206637 34/103 (33%)
Cadherin_repeat 713..810 CDD:206637
Cadherin_repeat 819..936 CDD:206637
Cadherin_repeat 953..1049 CDD:206637
Cadherin_repeat 1057..1166 CDD:206637
Cadherin_repeat 1175..1279 CDD:206637
Cadherin_repeat 1293..1390 CDD:206637
Cadherin_repeat 1402..1513 CDD:206637
Cadherin_repeat 1523..1628 CDD:206637
Cdhr1NP_446024.1 Cadherin_repeat 42..130 CDD:206637 46/93 (49%)
Cadherin_repeat 139..242 CDD:206637 26/114 (23%)
Cadherin_repeat 251..350 CDD:206637 37/111 (33%)
Cadherin_repeat 364..469 CDD:206637 33/111 (30%)
Cadherin_repeat 478..573 CDD:206637 36/95 (38%)
Cadherin_repeat 580..679 CDD:206637 35/108 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 789..859
Blue background indicates that the domain is not in the aligned region.

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