DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and cdh7a

DIOPT Version :10

Sequence 1:NP_648973.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:XP_005163459.1 Gene:cdh7a / 567704 ZFINID:ZDB-GENE-061019-3 Length:801 Species:Danio rerio


Alignment Length:596 Identity:160/596 - (26%)
Similarity:269/596 - (45%) Gaps:93/596 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   955 IKEEMPIDSALFILQAEDPVTR-QPITSFELIEPKQVDYFQVAERTGEVILKKRLDYEALGDTGP 1018
            :.||...|..|::.:....|.: :....:.|........|.:.|.||::...||||.|      .
Zfish    67 VLEEYTGDEPLYVGKLHSDVDKGEGKVKYVLNGEGATSIFTIDENTGDIHATKRLDRE------E 125

  Fly  1019 EFELQVRANSADRQRS----TVSRVNITVENVNDNSPRFERNSYQATIIENRPHPERVIRVRALD 1079
            :....:||.:.||..:    ..|...|.|:::|||.|:|....|.|.:.|..|....|:.|:|.|
Zfish   126 QAYYTLRAQARDRATNLPVEPESEFVIKVQDINDNEPKFLDGPYNAQVPEMSPVGTSVVEVKATD 190

  Fly  1080 KDAVLNARDERLGYH-KIIYS-LQGEHAMLFDINNTTGEIIVASGQTIDRERTPRIQLQIKAEDS 1142
            .|      |...|.. :::|| |:|:  ..|.:...|| |:..:...:|||...:..|.|:|:|.
Zfish   191 AD------DPTYGNSARVVYSILEGQ--PYFSVEPKTG-IVRTALPNMDREARDQYLLVIQAKDM 246

  Fly  1143 PGRPTDAKQSVVELQIEVLDVNDNAPEFTQKKYSTVIPENAQIDSFVLQLEAVDADEGLGGEVRY 1207
            .|: .........:.:.:.|||||.|.|::|.|...:||:..:.|.|.:::|:|:|.|...|:.|
Zfish   247 VGQ-MGGLSGTTSVTVTLTDVNDNPPRFSRKSYQFAVPESLPVASVVAKIKALDSDIGPNAEMDY 310

  Fly  1208 ELVNEGEANGLFKI----DTKSGLISTRRNLTGKGRAHPYVLIVRAQDNGNQMPK---QPTLSTD 1265
            .:: ||:..|:|::    ||:.|:|:.::||..:.:: .|.|.:.| .|.|..|:   |...|..
Zfish   311 RII-EGDGLGVFRVTTDKDTQEGVITLQKNLDFETKS-SYTLKIEA-SNRNIDPRFLSQGPFSDT 372

  Fly  1266 TDVRIYIGDVSANDGVPYFLSPRVGQMANVTENAVTGAPVFQVIASDPDDESTPSGTITYRILPD 1330
            ..||:.:.:|   |..|.|.|| :.:|. |:|.|..|..:..|.|.|||..::|   |.|.|..:
Zfish   373 AMVRLTVENV---DEPPVFSSP-LSKMV-VSEAAKVGTMIGTVSAMDPDTTNSP---IRYSIDRN 429

  Fly  1331 TPDAEAFVIDAHSGLITTRQSMDRETKDMYRILLEVSDNGQPKQSATRILQIAILDVDDHEPRFA 1395
            |.....|.|::.:|:|:|.:.:|||...::.|.:...::..|.|....:..|.::|::|:.|.||
Zfish   430 TDLERFFNIESTTGVISTAKPLDREANAVHNITILAIESMDPSQVGKGVALITVMDINDNAPVFA 494

  Fly  1396 READ------AGPLSMSVREEEPAGTIVGNFSALDED------------LGENAAIDYVIIDGNN 1442
            .|.:      .||           |.::...||:|:|            ..|.|        ||.
Zfish   495 IEYETFLCESVGP-----------GQVIETISAVDKDEPPSGHRFFFSLTAETA--------GNM 540

  Fly  1443 EQLFTIERNNESLAILKTKKP-IDREQVESFTLTIKCLKLGEPGYKFIGDPYDRQDLSHLRINVR 1506
            .  ||:..|.::.|.:.||:. ..|.....:.|.:..:..|.|...           |...:::|
Zfish   541 N--FTLRDNKDNTASVLTKRSGFQRRDQSMYRLPVLIVDSGTPALS-----------STNTLSIR 592

  Fly  1507 VLDID-DNLPK 1516
            |.|.| |..|:
Zfish   593 VCDCDPDGTPQ 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_648973.1 Cadherin_repeat 33..124 CDD:206637
Cadherin_repeat 132..240 CDD:206637
Cadherin_repeat 249..361 CDD:206637
Cadherin_repeat 487..581 CDD:206637
Cadherin_repeat 589..686 CDD:206637
Cadherin_repeat 713..810 CDD:206637
Cadherin_repeat 819..936 CDD:206637
Cadherin_repeat 953..1049 CDD:206637 23/98 (23%)
Cadherin_repeat 1057..1166 CDD:206637 30/110 (27%)
Cadherin_repeat 1175..1279 CDD:206637 32/110 (29%)
Cadherin_repeat 1293..1390 CDD:206637 27/96 (28%)
Cadherin_repeat 1402..1513 CDD:206637 25/124 (20%)
Cadherin_repeat 1523..1628 CDD:206637
cdh7aXP_005163459.1 CA 84..162 CDD:214520 21/83 (25%)
Cadherin_repeat 168..269 CDD:206637 30/110 (27%)
Cadherin_repeat 277..384 CDD:206637 32/112 (29%)
Cadherin_repeat 397..489 CDD:206637 27/94 (29%)
Cadherin_repeat 496..595 CDD:206637 25/130 (19%)
CADH_Y-type_LIR 732..791 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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