DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and stan

DIOPT Version :9

Sequence 1:NP_001246814.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:NP_001260871.1 Gene:stan / 36125 FlyBaseID:FBgn0024836 Length:3648 Species:Drosophila melanogaster


Alignment Length:1408 Identity:374/1408 - (26%)
Similarity:549/1408 - (38%) Gaps:374/1408 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 FVDDRD----MGENSRYELSLRDVFNAARVFEVSPTESQGRTPVVVKVLNASRLDYDVVDPDLRK 450
            |:|..|    :...||..::.|||..|..:::||.|.:          :...|  .|:||.|.| 
  Fly   278 FLDVNDERFAIEHQSRDLVASRDVCIAESMWKVSITFN----------IRCDR--RDIVDSDHR- 329

  Fly   451 FEFDLVASVKGVEKAKTRVEIHLLDAND-------------NAPVFDQGTYRFTAAENLPVDAII 502
                            .::..|..:.||             .:|.|:|..|..:..|..|..|.:
  Fly   330 ----------------LKIVYHHQEFNDTDIARRVRRELRNQSPYFEQALYVASVLEEQPAGAAV 378

  Fly   503 GHVKATD-LDSGEFGHVRYVLKGFGADNFYVNPETGGVYLLKPLDYEKQSSYSLTVVAIDGG--Q 564
            ..|:|.| .||.....:..:|.......|.|:..||.|.....||.|....:...|||.|..  .
  Fly   379 TTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPP 443

  Fly   565 REANANLFVGVTDVNDNHPNFESKEYSRTIREGAALFEPQFFVRAHDAD-GPSQGNGRVKYSIVS 628
            |.....|.|.|.|.||:.|.||::::..:|||||.:......:||.|.| |.   |..::|.|.:
  Fly   444 RSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGK---NAEIEYGIEA 505

  Fly   629 ENSIAG-------NVFRIEPDTGEIVIQKAARSMDTERGE-YELVVSATDFGIPPLSN---TTRV 682
            ....||       .:|||:..:|.|   ....|:|.|..: |.|:|:|.|........   |..|
  Fly   506 VTDGAGLAQDQEMPIFRIDSRSGVI---STRSSLDRETSDSYHLLVTAADLASAQSERRTATASV 567

  Fly   683 LVRVGISGNQRPIFRGHFQNMENLPIIGPPSYRVSIPENAAAG---SNVTSVSAHDPD-GLDSLL 743
            .|:|             ..:.:|.|.....:|.|.:||:...|   :.|..:.|.|.| |.::.:
  Fly   568 QVKV-------------LDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAI 619

  Fly   744 RYRIVGAN--DNFEIDEISGLIT-VSPQARIDRDSNMNSFEIIVNAVDSGTPIPETATTTVYVNV 805
            ||.|:|.|  ..|.||.:||.:: |.|   :|.:| :.|:.:::.|.|.|:| ..:.||.:.|||
  Fly   620 RYAIIGGNTQSQFSIDSMSGDVSLVKP---LDYES-VRSYRLVIRAQDGGSP-SRSNTTQLLVNV 679

  Fly   806 KDINDERPKFEQNSYATYVSERTAVGESVLRVKAIDKDLNSKLEYSMVGPVAATTKAGVSIANRS 870
            .|.||..|:|..:.:...|.|...||.:::||:|.|.|..:..|                     
  Fly   680 IDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAE--------------------- 723

  Fly   871 NYRLQEAFRVDSQSGEIFVNGTLRHDVAAIIIFTVGVRDLN--AEVDPEGQVDTTEVTVYVQSFQ 933
                                          |.:::..||.|  ..|||                 
  Fly   724 ------------------------------ITYSISERDDNFPLAVDP----------------- 741

  Fly   934 DTNPVFKNTGWTSSRPVIDVKIKEEMPIDSALFILQAEDPVTRQPITSFELIEPKQVDYFQVAER 998
                   .|||                       :|...|:.|:....|.         |||..:
  Fly   742 -------RTGW-----------------------VQTIKPLDREEQGRFA---------FQVVAK 767

  Fly   999 TGEVILKKRLDYEALGDTGPEFELQVRANSADRQRSTVSRVNITVENVNDNSPRFERNSYQATII 1063
            .|.|                            ..:|..|.|.|||::||||.|.|....|:|.:.
  Fly   768 DGGV----------------------------PPKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804

  Fly  1064 ENRPHPERVIRVRALDKDAVLNARDERLGYHKIIYSLQGEHAMLFDINNTTGEIIVASGQTIDRE 1128
            |::|....|..|.|.|.|     .|.||.|.....:.:|.    |.|.:..|..::...|::|.:
  Fly   805 EDQPPGTPVTTVTATDPD-----EDSRLHYEITTGNTRGR----FAITSQNGRGLITIAQSLDYK 860

  Fly  1129 RTPRIQLQIKAEDSPGRPTDAKQSVVELQIEVLDVNDNAPEFTQKKYSTVIPENAQIDSFVLQLE 1193
            :..|..|.:.|.||.||...|     .:.|.:.|.|:.||.|....||..:.|:|.:.:.||.:.
  Fly   861 QEKRFLLTVAATDSGGRSDTA-----TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVS 920

  Fly  1194 AVDADEGLGGEVRYELVNEGEANGL-----FKIDTKSGLISTRRNL---TGKGRAHPYVLIVRAQ 1250
            |.|:|.|:..::.|.| ||...|||     |.|:.::|.|.|...|   |..|    |:|.|.|:
  Fly   921 ATDSDVGVNAQITYSL-NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSG----YLLTVTAK 980

  Fly  1251 DNGNQMPKQPTLSTDTDVRIYIGDVSANDGVPYFLSPRVGQMANVTENAVTGAPVFQVIASDPDD 1315
            |.||     |:||..|||.|.:.||  ||..|.|.||.  ..|::.|:|:.|..|.||.||||| 
  Fly   981 DGGN-----PSLSDTTDVEIGVTDV--NDNAPAFKSPL--YQASILEDALVGTSVIQVAASDPD- 1035

  Fly  1316 ESTPSGTITYRILPDTPDAE--AFVIDAHSGLITTRQSMDRETKDMYRILLEVSDNGQPKQSATR 1378
             ...:|.|.| :|.|. |.|  :||||..||.|.|.:.:|||:..::.:.....|.|.|..|:|.
  Fly  1036 -VGLNGRIKY-LLSDR-DIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTV 1097

  Fly  1379 ILQIAILDVDDHEPRFAREADAGPLSMSVREEEPAGTIVGNFSALDEDLGENAAIDYVIIDGNNE 1443
            .:||.:.||:|..|.||.:    .:::.|.|..|.|::||...|.|.|.|.||.:.|.||.|::.
  Fly  1098 EVQIRLEDVNDSPPTFASD----KITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDS 1158

  Fly  1444 QLFT-IERNNESLAILKTKKPIDREQV-ESFTLTIKCLKLGEPGYKFIGDPYDRQDLSHLRINVR 1506
            ..|: :.|.....|.|.|...:|.|.. :.|.|.::.           ..|..|.| :|  |.:.
  Fly  1159 NAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA-----------ASPPLRND-AH--IEIL 1209

  Fly  1507 VLDIDDNLPKFEQ------------PDPTVGIRINVPIDTVVTTLKASDADAEAPPVGLSIENVT 1559
            |.|::||.|....            |...:|   .:|         |.|||...           
  Fly  1210 VTDVNDNAPVLRDFQVIFNNFRDHFPSGEIG---RIP---------AFDADVSD----------- 1251

  Fly  1560 FVPQFYKRSRSLAVGNLHNLFTLNNRTGELRTGGSFADYVDGYFLMRVMANNSVQPKRQAHSNLK 1624
                  |....:..||..||..||:.:|.|.........|..:..|.|..::.:. :.:|...|.
  Fly  1252 ------KLHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDGIN-EAKAIMQLS 1309

  Fly  1625 VFVIRDKSLLKFVFARPPNEIQHNIRPFQEQLQKKLKPL------GL-------ELHVL------ 1670
            |.:|.:..|...|..| .||:..         :..|.||      ||       :.|:.      
  Fly  1310 VRLITEDMLFNSVTVR-LNEMTE---------EAFLSPLLNFFLDGLAAIIPCPKEHIFVFSIQD 1364

  Fly  1671 DTQVFT----------RPDMSLDFTATSSCFQ--MFKNGAALS 1701
            ||.|.:          |||:|.:...|....|  ::.|.|.|:
  Fly  1365 DTDVSSRILNVSFSARRPDVSHEEFYTPQYLQERVYLNRAILA 1407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_001246814.1 Cadherin_repeat 33..124 CDD:206637
Cadherin_repeat 132..240 CDD:206637
Cadherin_repeat 249..361 CDD:206637
Cadherin_repeat 369..479 CDD:206637 21/105 (20%)
Cadherin_repeat 487..581 CDD:206637 28/96 (29%)
Cadherin_repeat 589..686 CDD:206637 31/108 (29%)
Cadherin_repeat 713..810 CDD:206637 35/103 (34%)
Cadherin_repeat 819..936 CDD:206637 17/118 (14%)
Cadherin_repeat 953..1049 CDD:206637 17/95 (18%)
Cadherin_repeat 1057..1166 CDD:206637 30/108 (28%)
Cadherin_repeat 1175..1279 CDD:206637 41/111 (37%)
Cadherin_repeat 1293..1390 CDD:206637 39/98 (40%)
Cadherin_repeat 1402..1513 CDD:206637 32/112 (29%)
Cadherin_repeat 1523..1628 CDD:206637 21/104 (20%)
stanNP_001260871.1 Cadherin_repeat 364..460 CDD:206637 28/95 (29%)
Cadherin_repeat 468..577 CDD:206637 32/127 (25%)
Cadherin_repeat 585..685 CDD:206637 36/104 (35%)
Cadherin_repeat 693..790 CDD:206637 37/231 (16%)
Cadherin_repeat 799..891 CDD:206637 29/105 (28%)
Cadherin_repeat 901..1003 CDD:206637 42/113 (37%)
Cadherin_repeat 1012..1108 CDD:206637 39/99 (39%)
Cadherin_repeat 1118..1216 CDD:206637 32/111 (29%)
Cadherin_repeat 1235..1313 CDD:206637 22/107 (21%)
EGF_CA 1483..1518 CDD:238011
LamG 1558..1734 CDD:238058
EGF 1760..1789 CDD:278437
Laminin_G_2 1826..1944 CDD:280389
TNFRSF <1963..2061 CDD:304602
EGF_Lam 2095..2140 CDD:214543
HRM 2144..2200 CDD:280888
GAIN 2293..2458 CDD:293098
GPS 2743..2802 CDD:295363
7tm_4 2809..3028 CDD:304433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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