DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and Cdh6

DIOPT Version :10

Sequence 1:NP_648973.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:NP_037059.2 Gene:Cdh6 / 25409 RGDID:2322 Length:790 Species:Rattus norvegicus


Alignment Length:593 Identity:162/593 - (27%)
Similarity:258/593 - (43%) Gaps:108/593 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   991 DYFQVAERTGEVILKKRLDYEALGDTGPEFELQVRA--NSADRQRSTVSRVNITVENVNDNSPRF 1053
            |.|.:.|.||::...||||.|    ..|.:.|:.:|  ....|.....|...|.:.::|||.|.|
  Rat    99 DLFIINENTGDIQATKRLDRE----EKPVYILRAQAINRRTGRPVEPESEFIIKIHDINDNEPIF 159

  Fly  1054 ERNSYQATIIENRPHPERVIRVRALDKDAVLNARDERLGYH-KIIYS-LQGEHAMLFDINNTTGE 1116
            .::.|.||:.|.......|::|.|.|.|      |...|.. |::|| |||:  ..|.:.:.|| 
  Rat   160 TKDVYTATVPEMADVGTFVVQVTATDAD------DPTYGNSAKVVYSILQGQ--PYFSVESETG- 215

  Fly  1117 IIVASGQTIDRERTPRIQLQIKAEDSPGRPTDAKQSVVELQIEVLDVNDNAPEFTQKKYSTVIPE 1181
            ||..:...:|||...:.|:.|:|:|..|: .........:.|.:.|||||.|.|.|..|....||
  Rat   216 IIKTALLNMDRENREQYQVVIQAKDMGGQ-MGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279

  Fly  1182 NAQIDSFVLQLEAVDADEGLGGEVRYELVNEGEANGLFKI----DTKSGLISTRRNLTGKGRAHP 1242
            ::...:.:.:::|.|||.|...|:.|. :.:||.:.:|.:    :|:.|:|:.::.|..: :...
  Rat   280 SSPPGTPIGRIKASDADVGENAEIEYS-ITDGEGHDMFDVITDQETQEGIITVKKLLDFE-KKRV 342

  Fly  1243 YVLIVRAQDNGNQMPKQPTLSTDTD---VRIYIGDVSANDGVPYFLSPRVGQMANVTENAVTGAP 1304
            |.|.|.| .|.:..|:...|....|   |||.:.||   |..|.|  .::..:..:.|:|.....
  Rat   343 YTLKVEA-SNPHIEPRFLYLGPFKDSATVRIVVDDV---DEPPVF--SKLAYILQIREDAQINTT 401

  Fly  1305 VFQVIASDPDDESTPSGTITYRILPDTPDAEAFVIDAHSGLITTRQSMDRETKDMYRILLEVSDN 1369
            :..|.|.|||....|   :.|.:...|.....|.||:.:|.|.|.:.:||||...:.|.:..::.
  Rat   402 IGSVAAQDPDAARNP---VKYSVDRHTDMDRIFNIDSGNGSIFTSKLLDRETLLWHNITVIATEI 463

  Fly  1370 GQPKQSATRILQIAILDVDDHEPRFAREADAGPLSMSVREEEPAGTIVGNFSALDED-------- 1426
            ..||||:...|.|.:|||:|:.|.||...:.     .|.|:..|..::....|:|:|        
  Rat   464 NNPKQSSRVPLYIKVLDVNDNAPEFAEFYET-----FVCEKAKADQLIQTLHAVDKDDPYSGHQF 523

  Fly  1427 ---LGENAAIDYVIIDGNNEQLFTIERNNESLAILKTKKPIDREQVESFTLTIKCLKLGEPGYKF 1488
               |...||      .|:|   |||:.|.::.|.:.|:|                          
  Rat   524 SFSLAPEAA------SGSN---FTIQDNKDNTAGILTRK-------------------------- 553

  Fly  1489 IGDPYDRQDLSHLRINVRVLDIDDNLPKFEQPDPTVGIRI-------NVPIDTVVTTLKASDADA 1546
              :.|:|.::|...:.|   .|.||....:....||.:|:       |         :::..|:|
  Rat   554 --NGYNRHEMSTYLLPV---VISDNDYPVQSSTGTVTVRVCACDHHGN---------MQSCHAEA 604

  Fly  1547 EAPPVGLS 1554
            ...|.|||
  Rat   605 LIHPTGLS 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_648973.1 Cadherin_repeat 33..124 CDD:206637
Cadherin_repeat 132..240 CDD:206637
Cadherin_repeat 249..361 CDD:206637
Cadherin_repeat 487..581 CDD:206637
Cadherin_repeat 589..686 CDD:206637
Cadherin_repeat 713..810 CDD:206637
Cadherin_repeat 819..936 CDD:206637
Cadherin_repeat 953..1049 CDD:206637 17/59 (29%)
Cadherin_repeat 1057..1166 CDD:206637 34/110 (31%)
Cadherin_repeat 1175..1279 CDD:206637 30/110 (27%)
Cadherin_repeat 1293..1390 CDD:206637 30/96 (31%)
Cadherin_repeat 1402..1513 CDD:206637 23/121 (19%)
Cadherin_repeat 1523..1628 CDD:206637 10/39 (26%)
Cdh6NP_037059.2 CA 79..157 CDD:214520 19/61 (31%)
Cadherin_repeat 163..264 CDD:206637 34/110 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..288 11/28 (39%)
Cadherin_repeat 272..379 CDD:206637 30/112 (27%)
Cadherin_repeat 388..484 CDD:206637 30/98 (31%)
Cadherin_repeat 492..589 CDD:206637 28/141 (20%)
CADH_Y-type_LIR 723..782 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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