DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad74A and Cdh7

DIOPT Version :10

Sequence 1:NP_648973.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:NP_766441.1 Gene:Cdh7 / 241201 MGIID:2442792 Length:785 Species:Mus musculus


Alignment Length:578 Identity:167/578 - (28%)
Similarity:268/578 - (46%) Gaps:82/578 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   993 FQVAERTGEVILKKRLDYEALGDTGPEFELQVRANSADRQRS----TVSRVNITVENVNDNSPRF 1053
            |.:.|.||::...||||.|      .:....:||.:.||..:    ..|...|.::::|||.|:|
Mouse    95 FIIDENTGDIHATKRLDRE------EQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKF 153

  Fly  1054 ERNSYQATIIENRPHPERVIRVRALDKDAVLNARDERLGYH-KIIYS-LQGEHAMLFDINNTTGE 1116
            ....|.|.:.|..|....|::|.|.|.|      |...|.. :::|| |||:  ..|.:...|| 
Mouse   154 LDGPYTAGVPEMSPVGTSVVQVTATDAD------DPTYGNSARVVYSILQGQ--PYFSVEPKTG- 209

  Fly  1117 IIVASGQTIDRERTPRIQLQIKAEDSPGRPTDAKQSVVELQIEVLDVNDNAPEFTQKKYSTVIPE 1181
            :|..:...:|||...:..|.|:|:|..|: .........:.:.:.|||||.|.|.::.|...:||
Mouse   210 VIKTALPNMDREAKDQYLLVIQAKDMVGQ-NGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPE 273

  Fly  1182 NAQIDSFVLQLEAVDADEGLGGEVRYELVNEGEANGLFKI----DTKSGLISTRRNLTGKGRAHP 1242
            :..:.|.|.:::|.|||.|:..|:.|::| :|:..|:|||    ||:.|:|:.::.|..:.:. .
Mouse   274 SLPVASVVARIKAADADIGVNAEMEYKIV-DGDGLGIFKISADKDTQEGIITIQKELDFEAKT-S 336

  Fly  1243 YVLIVRAQDNGNQMPKQPTL---STDTDVRIYIGDVSANDGVPYFLSPRVGQMANVTENAVTGAP 1304
            |.|.:.|. |.:..|:..:|   |..|.|:|.:.||   |..|.|.||....  .|:|....|..
Mouse   337 YTLRIEAA-NRDADPRFLSLGPFSDTTTVKIIVEDV---DEPPVFSSPLYPM--EVSEATQVGHI 395

  Fly  1305 VFQVIASDPDDESTPSGTITYRILPDTPDAEAFVIDAHSGLITTRQSMDRETKDMYRILLEVSDN 1369
            :..|.|.|||..::|   :.|.|..:|.....|.|||:||:|||.:|:||||..::.|.:...::
Mouse   396 IGTVAAHDPDSSNSP---VRYSIDRNTDLERYFNIDANSGVITTAKSLDRETNAVHNITVLAMES 457

  Fly  1370 GQPKQSATRILQIAILDVDDHEPRFAREADAGPLSMSVREEEPAGTIVGNFSALDEDLGENAAID 1434
            ..|.|.....:.|.|||::|:.|.||.:.:.     :|.|....|.::...||:|:|...|....
Mouse   458 QNPSQVGRGYVAITILDINDNAPEFAMDYET-----TVCENAQPGQVIQKISAVDKDEPSNGHQF 517

  Fly  1435 Y--VIIDGNNEQLFTIERNNESLAILKTKKPIDREQVES-FTLTIKCLKLGEPGYKFIGDPYDRQ 1496
            |  :..|..|...|:::.|.::.|.:.|::...|.|.:| :.|.|..:..|.|...         
Mouse   518 YFSLTTDMTNNHNFSLKDNKDNTASILTRRNGFRRQEQSVYYLPIFIVDSGSPSLS--------- 573

  Fly  1497 DLSHLRINVRVLDIDDNLPKFEQPDPTVGIRINVPIDTVVTTLKASDADAEAPPVGLS 1554
              |...:.:||.|.|                    .|.:..|   .:|:|...|.|||
Mouse   574 --STNTLTIRVCDCD--------------------ADGIAQT---CNAEAYVLPAGLS 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_648973.1 Cadherin_repeat 33..124 CDD:206637
Cadherin_repeat 132..240 CDD:206637
Cadherin_repeat 249..361 CDD:206637
Cadherin_repeat 487..581 CDD:206637
Cadherin_repeat 589..686 CDD:206637
Cadherin_repeat 713..810 CDD:206637
Cadherin_repeat 819..936 CDD:206637
Cadherin_repeat 953..1049 CDD:206637 16/59 (27%)
Cadherin_repeat 1057..1166 CDD:206637 31/110 (28%)
Cadherin_repeat 1175..1279 CDD:206637 35/110 (32%)
Cadherin_repeat 1293..1390 CDD:206637 33/96 (34%)
Cadherin_repeat 1402..1513 CDD:206637 27/113 (24%)
Cadherin_repeat 1523..1628 CDD:206637 8/32 (25%)
Cdh7NP_766441.1 CA 73..151 CDD:214520 18/61 (30%)
Cadherin_repeat 157..258 CDD:206637 31/110 (28%)
Cadherin_repeat 266..373 CDD:206637 35/112 (31%)
Cadherin_repeat 382..478 CDD:206637 33/100 (33%)
Cadherin_repeat 486..584 CDD:206637 25/113 (22%)
CADH_Y-type_LIR 718..777 CDD:460041
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.