DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and Cdh20

DIOPT Version :10

Sequence 1:NP_648973.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:NP_035930.1 Gene:Cdh20 / 23836 MGIID:1346069 Length:801 Species:Mus musculus


Alignment Length:608 Identity:166/608 - (27%)
Similarity:268/608 - (44%) Gaps:84/608 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   909 DLNAEV-----DPEGQVDTTEVTVYVQSFQDT------NPVFKNTGWTSSRPVIDVKIKEEMP-- 960
            ||.|.|     .||.:::|. .:...||.|.:      |..|....:|.:.|:...|:..:|.  
Mouse    27 DLTATVLSSTPMPEVELETL-FSGRSQSHQRSKRSWVWNQFFVLEEYTGTDPLYVGKLHSDMDRG 90

  Fly   961 IDSALFILQAEDPVTRQPITSFELIEPKQVDYFQVAERTGEVILKKRLDYEALGDTGPEFELQVR 1025
            ..|..:||..|....                .|.:.:.||::...:|||.|      ...:..:|
Mouse    91 DGSIKYILSGEGAGI----------------VFTIDDTTGDIHAIQRLDRE------ERAQYTLR 133

  Fly  1026 ANSADRQ----RSTVSRVNITVENVNDNSPRFERNSYQATIIENRPHPERVIRVRALDKDAVLNA 1086
            |.:.||:    ....|...|.::::|||.|:|....|.||:.|..|....||:|.|.|.|     
Mouse   134 AQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYIATVPEMSPVGTSVIQVTATDAD----- 193

  Fly  1087 RDERLGYH-KIIYS-LQGEHAMLFDINNTTGEIIVASGQTIDRERTPRIQLQIKAEDSPGRPTDA 1149
             |...|.. :::|| |||:  ..|.:::.|| :|..:...:|||.....::.|:|:|..|: ...
Mouse   194 -DPTYGNSARVVYSILQGQ--PYFSVDSKTG-VIRTALMNMDREAKEYYEVIIQAKDMGGQ-LGG 253

  Fly  1150 KQSVVELQIEVLDVNDNAPEFTQKKYSTVIPENAQIDSFVLQLEAVDADEGLGGEVRYELVNEGE 1214
            ......:.|.:.|||||.|.|.||.|...:.|:|.|.|.|.::.|.|.|||:..|::|.:| :|:
Mouse   254 LAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIV-DGD 317

  Fly  1215 ANGLFKIDT----KSGLISTRRNLTGKGRAHPYVLIVRAQDNGNQM------PKQPTLSTDTDVR 1269
            ....|.|:|    :.|:|:.::.|:.:.: ..|.|.|...:...:|      |.|.|    |.|.
Mouse   318 GADAFDINTDQNFQVGIITVKKPLSFESK-KSYTLKVEGSNPHLEMRFLNLGPFQDT----TTVH 377

  Fly  1270 IYIGDVSANDGVPYFLSPRVGQMANVTENAVTGAPVFQVIASDPDDESTPSGTITYRILPDTPDA 1334
            |.:.||   |..|.| .|.. ....|.|:...|..:..:.|.|||   ..:.:|.|.|...:...
Mouse   378 ISVEDV---DEPPVF-EPGF-YFVEVPEDVTIGTTIQIISAKDPD---VTNNSIRYSIDRGSDPG 434

  Fly  1335 EAFVIDAHSGLITTRQSMDRETKDMYRILLEVSDNGQPKQSATRILQIAILDVDDHEPRFAREAD 1399
            ..|.:|..:|.:.|.:.:|||....:.|.:...:...|.|..:..:.|.:|||:|:.|.|.|..:
Mouse   435 RFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVAVTIKVLDVNDNAPEFPRFYE 499

  Fly  1400 AGPLSMSVREEEPAGTIVGNFSALDEDLGENAAIDYVII--DGNNEQLFTIERNNESLAILKTKK 1462
            |     .:.|...||.::...||:|:|...|....|..:  :..|...||:..|.::.|.:.|::
Mouse   500 A-----FICENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANNPNFTVRDNQDNTARILTRR 559

  Fly  1463 PIDREQVES-FTLTIKCLKLGEP 1484
            ...|:|.:| |.|.|.....|:|
Mouse   560 SGFRQQEQSVFYLPILIADSGQP 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_648973.1 Cadherin_repeat 33..124 CDD:206637
Cadherin_repeat 132..240 CDD:206637
Cadherin_repeat 249..361 CDD:206637
Cadherin_repeat 487..581 CDD:206637
Cadherin_repeat 589..686 CDD:206637
Cadherin_repeat 713..810 CDD:206637
Cadherin_repeat 819..936 CDD:206637 10/37 (27%)
Cadherin_repeat 953..1049 CDD:206637 20/101 (20%)
Cadherin_repeat 1057..1166 CDD:206637 33/110 (30%)
Cadherin_repeat 1175..1279 CDD:206637 33/113 (29%)
Cadherin_repeat 1293..1390 CDD:206637 24/96 (25%)
Cadherin_repeat 1402..1513 CDD:206637 23/86 (27%)
Cadherin_repeat 1523..1628 CDD:206637
Cdh20NP_035930.1 CA 85..163 CDD:214520 21/99 (21%)
Cadherin_repeat 169..270 CDD:206637 33/110 (30%)
Cadherin_repeat 278..385 CDD:206637 33/115 (29%)
Cadherin_repeat 394..490 CDD:206637 24/98 (24%)
Cadherin_repeat 498..599 CDD:206637 24/90 (27%)
CADH_Y-type_LIR 733..792 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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