DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and cdh-4

DIOPT Version :9

Sequence 1:NP_001246814.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:NP_001317871.1 Gene:cdh-4 / 175590 WormBaseID:WBGene00000396 Length:4328 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_001246814.1 Cadherin_repeat 33..124 CDD:206637
Cadherin_repeat 132..240 CDD:206637
Cadherin_repeat 249..361 CDD:206637
Cadherin_repeat 369..479 CDD:206637
Cadherin_repeat 487..581 CDD:206637
Cadherin_repeat 589..686 CDD:206637
Cadherin_repeat 713..810 CDD:206637
Cadherin_repeat 819..936 CDD:206637
Cadherin_repeat 953..1049 CDD:206637
Cadherin_repeat 1057..1166 CDD:206637
Cadherin_repeat 1175..1279 CDD:206637
Cadherin_repeat 1293..1390 CDD:206637
Cadherin_repeat 1402..1513 CDD:206637
Cadherin_repeat 1523..1628 CDD:206637
cdh-4NP_001317871.1 Cadherin_repeat 160..254 CDD:206637
CA 416..490 CDD:214520
Cadherin_repeat 506..570 CDD:206637
Cadherin_repeat 615..716 CDD:206637
Cadherin_repeat 724..822 CDD:206637
Cadherin_repeat 832..925 CDD:206637
Cadherin_repeat 940..1042 CDD:206637
Cadherin_repeat 1051..1152 CDD:206637
Cadherin_repeat 1175..1235 CDD:206637
Cadherin_repeat 1269..1353 CDD:206637
Cadherin_repeat 1367..1463 CDD:206637
Cadherin_repeat 1473..1562 CDD:206637
Cadherin_repeat 1674..1779 CDD:206637
Cadherin_repeat 1887..1979 CDD:206637
Cadherin_repeat 1988..2075 CDD:206637
Cadherin_repeat 2085..2176 CDD:206637
Cadherin_repeat 2191..2280 CDD:206637
Cadherin_repeat 2291..2386 CDD:206637
CA <2449..2503 CDD:214520
Cadherin_repeat 2510..2598 CDD:206637
Cadherin_repeat 2612..2708 CDD:206637
Cadherin_repeat 2718..2808 CDD:206637
Cadherin_repeat 2817..2903 CDD:206637
Cadherin 2941..3009 CDD:421759
Cadherin_repeat 3018..3109 CDD:206637
Cadherin_repeat 3117..3212 CDD:206637
Cadherin_repeat 3221..3322 CDD:206637
Cadherin_repeat 3332..3418 CDD:206637
Cadherin_repeat 3440..3536 CDD:206637
EGF 3710..3749 CDD:238010
LamG 3781..3907 CDD:214598
EGF 3933..3963 CDD:394967
EGF_CA 3968..4004 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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