DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and LOC108191765

DIOPT Version :9

Sequence 1:NP_001246814.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:XP_017214098.2 Gene:LOC108191765 / 108191765 -ID:- Length:888 Species:Danio rerio


Alignment Length:840 Identity:247/840 - (29%)
Similarity:374/840 - (44%) Gaps:167/840 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLPLFLSLTAGQLVNQPPQFVP---------GTGDMSRFSLSENTPVGSPVFQLKGTDPEGGRL 59
            |||.|.|.::.|:     ..|.|         .:|:|:.|||:|:|.||:.|:.|.|:||||..:
Zfish    11 LLLLLSLCMSTGK-----SDFAPYFYDNGAGSSSGNMALFSLAEDTAVGTHVYTLNGSDPEGDPV 70

  Fly    60 KYSI-----SGPVFSVDRETGVVRLRQELDRETQDTVEVIISITDEGIYGTEPNTVSQRRVIPVR 119
            .:.:     |...|||:.::|.|.|.:.||||.||.:...:||||      ..|.|.:...:.:.
Zfish    71 TFGVTFDKGSKQFFSVEPKSGRVTLVEHLDRELQDEIIASVSITD------GRNKVVESVRVFIT 129

  Fly   120 DYNDNQPTFLGRPYTASVSESLPVGSELSVEPPIVVVDRDEGINSEVQMKCLEENDICDIFEVRA 184
            |.||.:|.|:..|....|.|.:..|..:.   .:..||||.|....|........|  .:|.:  
Zfish   130 DVNDEKPEFMNLPLRVDVPEDVASGCSIF---RVQAVDRDLGSGGSVSYFLQSSPD--GLFSI-- 187

  Fly   185 VKISDGNYTARVALKQQLDFESRPSYILTISASDSALDNR-----LSSLATISINVIDIQDQPPI 244
                || ::..:.::::||||:..::.:|:.|.|......     |||.|.|:|:|.|:||.||:
Zfish   188 ----DG-HSGVLRVRERLDFETSRTHFITVVAKDGGGKYHGKYQVLSSTAVITIHVQDVQDSPPV 247

  Fly   245 FTNAPYSATVPENTPAGVSILTVKAVDGDVGIPREIFLSLEDEPFGHFELVPFGDPRDGTAVLQT 309
            |...||...|.|.:..|..|.||.|.|||...|..|..|:.:...|.|.:      ...:..:..
Zfish   248 FVGTPYFGFVYEVSVPGSEIFTVFAKDGDQSSPNPIHYSILNGSDGFFSI------NSSSGCISL 306

  Fly   310 TSEPLDRENAEILQNGGVYVFSIRATELIDGAIPAEHSLTRVTIVVTDVDDHQPTFSGP-----H 369
            .|.|:...|.       :|...::|.|:....:.|:.|:|.|||.|.|:::|.|||.|.     |
Zfish   307 VSFPVQLRNE-------LYELRVQAAEVGADGVLADSSITTVTIRVVDLNNHPPTFYGESGQQNH 364

  Fly   370 FNVSITENLANGMPLPGLSIFVDDRDMGENSRYELSLRDVFNAARVFEVSPTESQGRTPVVVKVL 434
            |::|:.|:.|.|..|.||.|.|:|.|.|.|:::.|.|   ...:||..|.|........|.|.|.
Zfish   365 FDISMYEHPAEGEILRGLKITVNDSDQGANAKFRLVL---VGPSRVLRVVPQTVLNEAQVTVIVE 426

  Fly   435 NASRLDYDVVDPDLRKFEFDLVASVKGVE-------KAKTRVEIHLLDANDNAPVFDQGTYRFTA 492
            |:|.:||:       |.:| |...:..||       .|...:.|:|||.|||.|.|....|....
Zfish   427 NSSAIDYE-------KHQF-LTFKLLAVEIDTPERFSATADIVINLLDTNDNTPKFSSEFYIARI 483

  Fly   493 AENLPVDAIIGHVKATDLDSGEFGHVRYVLKGFGADNFYVNPETGGVYLLKP---LDYEKQSSYS 554
            .||.|..:.:..|.|||.|||.:|.|:|.:.|.|||.|.::|.:|.:| .:|   ||.|.:|.|:
Zfish   484 PENSPGGSNVVSVTATDPDSGLWGEVKYSIYGSGADLFLIHPSSGIIY-TQPWAALDAEVKSKYN 547

  Fly   555 LTVVAIDGGQREANANLFVGVTDVNDNHPNFESKEYSRTIREGAALFEPQFFVRAHDADGPSQGN 619
            ..|.|.|...:.:.|.:||.|.|.||:.|.|......:|:..||.:     .::|.|.|. .:.|
Zfish   548 FYVKAEDTEGKYSLAEVFVTVLDQNDHPPEFNENFLEKTMIIGAPV-----KIQAVDEDA-EEPN 606

  Fly   620 GRVKYSIVSENSIAGNVFRIEPDTGEIVIQKAARSMDTERG-------EYELVVSATDFGIPPLS 677
            ..::|||:..:  ..|:|.|...||||.::...:|::..:.       .:.:||.|.|.|.|..|
Zfish   607 NLIEYSIMKAD--PDNIFDINTSTGEIKLKPYIKSLEIVQNISRQRECRWSVVVQARDRGSPSFS 669

  Fly   678 NTTRVLVRVGISGNQRPIFRGHF-----QNMEN------LPIIG--------------------- 710
            .|  .:|::.|:...|  |.|..     |:.||      |.:.|                     
Zfish   670 TT--AVVKIDITEANR--FNGPMSTFLKQSRENPLQVLVLALSGITAMVLLTVLISTIIYCRNTK 730

  Fly   711 ----PPSYRV------------------------SIPENAAAG------SNVTSVSAHDP 736
                .|:.|:                        ::||...:|      :|.:|..||.|
Zfish   731 SNRIMPARRIIRRRAKEAQHWSFRPAFGQTEPGPAVPEEEESGGNQNTNNNSSSPGAHSP 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_001246814.1 Cadherin_repeat 33..124 CDD:206637 35/95 (37%)
Cadherin_repeat 132..240 CDD:206637 29/112 (26%)
Cadherin_repeat 249..361 CDD:206637 31/111 (28%)
Cadherin_repeat 369..479 CDD:206637 39/116 (34%)
Cadherin_repeat 487..581 CDD:206637 37/96 (39%)
Cadherin_repeat 589..686 CDD:206637 27/103 (26%)
Cadherin_repeat 713..810 CDD:206637 9/54 (17%)
Cadherin_repeat 819..936 CDD:206637
Cadherin_repeat 953..1049 CDD:206637
Cadherin_repeat 1057..1166 CDD:206637
Cadherin_repeat 1175..1279 CDD:206637
Cadherin_repeat 1293..1390 CDD:206637
Cadherin_repeat 1402..1513 CDD:206637
Cadherin_repeat 1523..1628 CDD:206637
LOC108191765XP_017214098.2 Cadherin_repeat 45..133 CDD:206637 34/93 (37%)
Cadherin_repeat 142..243 CDD:206637 29/112 (26%)
Cadherin_repeat 252..351 CDD:206637 31/111 (28%)
Cadherin_repeat 364..470 CDD:206637 39/116 (34%)
Cadherin_repeat 479..574 CDD:206637 37/95 (39%)
Cadherin_repeat 589..682 CDD:206637 27/102 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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