DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad74A and cdh23

DIOPT Version :10

Sequence 1:NP_648973.1 Gene:Cad74A / 39936 FlyBaseID:FBgn0036715 Length:1820 Species:Drosophila melanogaster
Sequence 2:XP_031762583.1 Gene:cdh23 / 100493009 XenbaseID:XB-GENE-957613 Length:3353 Species:Xenopus tropicalis


Alignment Length:1906 Identity:545/1906 - (28%)
Similarity:844/1906 - (44%) Gaps:326/1906 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLPLFL---SLTAGQLVNQPPQFVPGTGDMSRFSLSENTPVGSPVFQLKGTDPEGGRLKYSISG- 65
            ||..||   |.|.|...|:.|.|:....| :...:||:|.||:.|.||...|.:..:|.:.:.| 
 Frog    10 LLFTFLVLQSFTLGLGYNRLPYFLNYFFD-TYLLISEDTAVGTSVTQLLARDLDDDKLVFGVVGD 73

  Fly    66 ---PVFSVDRETGVVRLRQELDRETQDTVEVIISITD-EGIYGTEPNTVSQRRVIPVRDYNDNQP 126
               ..|:|:.|||||.|||.|||||:....|..|::| :|:...:.|       |.|.|.|||.|
 Frog    74 EAKKFFAVESETGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGKVN-------IQVGDVNDNAP 131

  Fly   127 TFLGRPYTASVSESLPVGSELSVEPPIVVV---DRDEGINSEVQMKCLEENDICDIFEVRAVKIS 188
            ||..:|||..::|:.|||:      ||.:|   |.|:|....|.......:....|.:.|.:   
 Frog   132 TFHNQPYTVRIAENTPVGT------PIFIVNATDPDQGTGGSVLYSIQPPSSFFSIDKSRGI--- 187

  Fly   189 DGNYTARVALKQQLDFESRPSYILTISASDSALDNRLSSLATISINVIDIQDQPPIFTNAPYSAT 253
                   |.:...||:|...:|.|.::|:|......||:||.::|.:.||||..|||.|.|||..
 Frog   188 -------VTVINPLDYEITQAYQLQVNATDQDKTKPLSTLANLAITITDIQDMDPIFINLPYSTN 245

  Fly   254 VPENTPAGVSILTVKAVDGDVGIPREI-FLSLEDEPFGHFELVPFGDPRDGTAVLQTTSEPLDRE 317
            :.||:|.|.::..|.|:|.|.|.||.| :..:.......|.|       |..:...|.:..||||
 Frog   246 IYENSPPGRTVRMVTAIDQDKGRPRGIGYTIVSGNTNSIFAL-------DYISGALTLNGQLDRE 303

  Fly   318 NAEILQNGGVYVFSIRATELIDGAIPAEHSLTRV-TIVVTDVDDHQPTFSGPHFNVSITENLANG 381
            |.  |...| ::.:::.|||:|...|::.::|.. .|:|.|::|:.|.|:...:.|||.|....|
 Frog   304 NP--LYTAG-FILTVKGTELLDDRSPSDATVTTTFNILVIDINDNAPQFNSSEYTVSIPELAQLG 365

  Fly   382 MPLPGLSIFVDDRDMGENSRYELSLRDVFNAARVFEVSPTESQGRTPVVVKVLNASRLDYDVVDP 446
            ..|| |.|.|.|||.|.||.:|:.|  |.|.:..|.:|||..||:..:.|:|  |..||::.:. 
 Frog   366 FALP-LYIQVQDRDEGLNSAFEVYL--VGNNSNHFIISPTSVQGKADIRVRV--AVPLDFETIS- 424

  Fly   447 DLRKFEFDLVASVKGVEK-AKTRVEIHLLDANDNAPVFDQGTYRFTAAENLPVDAIIGHVKATDL 510
               ::||.|.|:...::. ..::|:|:|::.|||.|:|.|..|..:..||:.|...|..::|||.
 Frog   425 ---RYEFSLFANESVLDHVGYSQVKINLINENDNRPIFSQALYNISLYENVTVGTTILKIQATDN 486

  Fly   511 DSGEFGHVRYVLKGFGADNFYVNPETGGVYLLKPLDYEKQSSYSLTVVAIDGGQREANANLFVGV 575
            |.|.||.|.|.... ..|.|.::.:||.:.::..||||....|:|||:|.|||..|....:.:.|
 Frog   487 DIGSFGKVSYFFSD-DPDRFSLDKDTGVITVITRLDYETTQRYTLTVIARDGGGEETTGRVRINV 550

  Fly   576 TDVNDNHPNFESKEYSRTIREGAALFEPQFF----VRAHDADGPSQGNGRVKYSIVSENSIAGNV 636
            .|||||.|.|:.:.|...|||.    ||...    :||.|.|  |..|.::.|||::.::.. :.
 Frog   551 LDVNDNMPIFQKESYLGAIREN----EPSVVTVVKLRATDED--SAPNNQITYSILNASAFQ-SY 608

  Fly   637 FRIEPDTGEIVIQKAARSMDTER---GEYELVVSATDFGIPPLSNTTRVLVRVGISGNQRPIFRG 698
            |.|....|..|| ...|.:|.|:   |...|.|.|.|.|:|.|::|..|.:.|            
 Frog   609 FEISISEGYGVI-TVTRPLDYEQISNGVISLTVMAKDSGVPSLNSTVPVSIEV------------ 660

  Fly   699 HFQNMENLPIIGPPSYRVSIPENAAAGSNVTSVSAHDPD-----GLDSLLRYRIVGANDNFEIDE 758
             |...:|.|.....||.:::.||..||:.|..::|.|.|     |.:|:: |.:.| :..|.|:.
 Frog   661 -FDENDNPPTFSRSSYVITVMENIIAGATVLFLNATDLDRSREYGQESII-YSLDG-SPQFRINA 722

  Fly   759 ISGLITVSPQARIDRDSNMNSFEIIVNAVDSGT-PIPETATTTVYVNVKDINDERPKFEQNSYAT 822
            .||.||.:  ..:||::. :.:.:|:.|||.|. |..:....||.:.:.||||..|:::...|..
 Frog   723 RSGEITTT--TLLDREAK-SEYILIIRAVDGGVGPNQKIGIATVNITLLDINDNAPQWKDEPYLI 784

  Fly   823 YVSERTAVGESVLRVKAIDKDL--NSKLEYSM------------------VG------------- 854
            .::|.|.....|..|.|||.||  |..|.||:                  .|             
 Frog   785 NLAEMTPPDSDVTTVVAIDPDLAENGTLVYSISPLNKFYTLNSTTGKIRTTGVVLDRENPNPVEA 849

  Fly   855 ----------------PVAATTKAGVSI------------------------------------- 866
                            |:.||:.|.||:                                     
 Frog   850 EMMRKIVISVTDRGRPPLRATSSATVSVNLLDLNDNDPTFQNLPFIAEILEGTATGASVFQVVAI 914

  Fly   867 ------ANRSNYRL-----QEAFRVDSQSGEIFVNGTL-RHDVAAIIIFTVGVRDLNAEVDPEGQ 919
                  ..:..||:     |..|.::|.:|.|.....| |..:||..:     |.:.::.....:
 Frog   915 DLDEGLNGQVTYRMPVGIPQMDFVINSTTGLITSTAVLDREKIAAYYL-----RVVASDAGTPSK 974

  Fly   920 VDTTEVTVYVQSFQDTNPVFKNTGWTSSRPVIDVKIKEEMPIDSALFILQAEDPVT-RQPITSFE 983
            ..|:.:||.|....|..|.|..|       :.:|.:.|.:|.|..:..|...|..| .....|:.
 Frog   975 TSTSTLTVSVLDVNDERPTFFPT-------IYNVSLAENIPRDYIVARLNCTDADTGLNAELSYF 1032

  Fly   984 LIEPKQVDYFQVAERTG----------EVILKKRLDYEALGDTGPEFELQVRANSADRQRSTVSR 1038
            :....|...|.|..|.|          |.:....|..||: |.||          |..:::..:.
 Frog  1033 ITGGNQDGKFTVGFRDGILRTVVNLDRETVASYTLVLEAI-DNGP----------AGNRKTGTAT 1086

  Fly  1039 VNITVENVNDNSPRFERNSYQATIIENRPHPERVIRVRALDKDAVLNARDERLGYHKIIYSLQGE 1103
            |::||.::|||.|.|.::||:|::.||.|....::::.|.|.|    ..|..|.:::|   |.|.
 Frog  1087 VSVTVLDINDNKPIFLKSSYEASVPENVPFSSSIVQLEATDAD----EGDNGLVWYRI---LSGN 1144

  Fly  1104 HAMLFDINNTTGEIIVASGQTIDRERTPRIQLQIKAEDSPGRPTDAKQSVVELQIEVLDVNDNAP 1168
            ....|.|:..|| :|:...|.:|||......|.::|.:|...|   .:|.|.:.|.|.||||..|
 Frog  1145 EKTNFRIDVNTG-LIMRGVQPLDRETNSSHVLVVEAYNSDQGP---MRSSVRVIIYVEDVNDEVP 1205

  Fly  1169 EFTQKKYSTV-IPENAQIDSFVLQLEAVDADEGLGGEVRYELVNEGEANGLFKIDTKSGLISTRR 1232
            .|||::||.: :.|...|.:.|..:.|.|.|.|.||.|.|::::  .|:|.|.||..:||::|..
 Frog  1206 VFTQQQYSRLGLRETVGIGTSVTVVRATDRDTGDGGLVTYKIIS--GADGKFDIDASTGLLTTID 1268

  Fly  1233 NLTGKGRAHPYVLIVRAQDNGNQMPKQPTLSTDTDVRIYIGDVSANDGVPYFLSPRVGQMANVTE 1297
            .|..:.:. .|.:.|.|.|..  :|......|     ||:..::..|.|..|.||.  ..|.:.|
 Frog  1269 YLDYETKT-TYYMNVSATDQA--VPFNRGFCT-----IYVTLMNEPDEVVQFTSPT--YKAVIIE 1323

  Fly  1298 NAVTGAPVFQVIASDPDDESTPSGTITYRILPDTPDAEA---FVIDAHSGLITTRQSMDRETKDM 1359
            |..||..|.:|.|...|:    ...::|: ...|..|:|   |.||..:|.||.:..:|||..|.
 Frog  1324 NIATGTEVVRVQARSIDN----LNQLSYK-FDQTTYAQALALFKIDGITGAITVKGLVDREKGDF 1383

  Fly  1360 YRILLEVSDNGQPKQSATRILQIAILDVDDHEPRFAREADAGPLSMSVREEEPAGTIVGNFSALD 1424
            |.:::...|.|..|.||  ::.|.:||.:|:.|:|...:|:   .::|.|:.|.|..|....|.|
 Frog  1384 YTLIVVADDGGPKKDSA--VVSITVLDENDNSPQFDPTSDS---VVNVPEDCPTGRRVALVQARD 1443

  Fly  1425 EDLGENAAIDYVIIDGNNEQLFTIERNNESLAILKTKKPIDREQVESFTLTIKCLKLGEPGYKFI 1489
            .|.|.|..:.:.:..||...:|.|...|.:|..:...|.||||..|.:||.|:....|.|..:  
 Frog  1444 PDDGNNGLVTFSLTAGNPSGIFEIRTTNNTLGEVFLIKSIDREVQELYTLKIQASDSGSPPRR-- 1506

  Fly  1490 GDPYDRQDLSHLRINVRVLDIDDNLPKFEQP-DPTVGIRINVPIDTVVTTLKASDADAEAPPVGL 1553
                     |...:.|.|.|::||.|.|::| ...|.:..||...|.|..:.|:|.|        
 Frog  1507 ---------SEYTLTVNVNDVNDNPPVFDKPFGYNVSVYENVGGGTSVIRVNATDKD-------- 1554

  Fly  1554 SIENVTFVPQFYKRSRSLAVGNLHNLFTLNNRTGELRTGGSFAD-YVDGYFLMRVMANNSVQPKR 1617
              :.:..|..:|     :..||....|.::..|||:.|..:..| ....::.:.|...:...|..
 Frog  1555 --KGLNSVLSYY-----ITQGNEDLTFRMDRLTGEIATRPAPPDREKQSFYKLVVTVEDEGNPAL 1612

  Fly  1618 QAHSNLKVFVIRDKSLLKFVFARPPNEIQHNIRPFQEQLQKKLKPLGLELHVLDTQVFTR---PD 1679
            .|.:.:.|.:: |::....||..|..|:           .:...||.|...:|.|....:   |:
 Frog  1613 SATTTVYVTIL-DENDNSPVFKSPVYEV-----------TRDEGPLSLNSVILTTTAVDQDEGPN 1665

  Fly  1680 MSLDFTATSSCFQMFKNGAALSFNEMQKLMNSQQLRQELIDIYAAYG-----VSEVESCSV---R 1736
            .::.::.::...|     ...|.|....|:   ::.:|| |.....|     |:..:.|.:   |
 Frog  1666 GTVTYSISAGNVQ-----ETFSINNATGLI---RVVKEL-DYEVCLGRYTLIVTATDRCPIVQRR 1721

  Fly  1737 RTHAAAIFAGMLTSAGAWLVF 1757
            .|..|.:...:......|..|
 Frog  1722 LTSTATVLVNVNDINDNWPTF 1742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad74ANP_648973.1 Cadherin_repeat 33..124 CDD:206637 35/95 (37%)
Cadherin_repeat 132..240 CDD:206637 31/110 (28%)
Cadherin_repeat 249..361 CDD:206637 35/113 (31%)
Cadherin_repeat 487..581 CDD:206637 35/93 (38%)
Cadherin_repeat 589..686 CDD:206637 33/103 (32%)
Cadherin_repeat 713..810 CDD:206637 32/102 (31%)
Cadherin_repeat 819..936 CDD:206637 38/214 (18%)
Cadherin_repeat 953..1049 CDD:206637 25/106 (24%)
Cadherin_repeat 1057..1166 CDD:206637 34/108 (31%)
Cadherin_repeat 1175..1279 CDD:206637 30/104 (29%)
Cadherin_repeat 1293..1390 CDD:206637 32/99 (32%)
Cadherin_repeat 1402..1513 CDD:206637 31/110 (28%)
Cadherin_repeat 1523..1628 CDD:206637 22/105 (21%)
cdh23XP_031762583.1 Cadherin_repeat 43..129 CDD:206637 35/92 (38%)
Cadherin_repeat 137..232 CDD:206637 31/110 (28%)
Cadherin_repeat 241..345 CDD:206637 35/113 (31%)
Cadherin_repeat 353..455 CDD:206637 39/110 (35%)
Cadherin_repeat 464..556 CDD:206637 35/92 (38%)
Cadherin_repeat 564..666 CDD:206637 35/122 (29%)
Cadherin_repeat 674..773 CDD:206637 33/103 (32%)
Cadherin_repeat 781..885 CDD:206637 21/103 (20%)
Cadherin_repeat 893..989 CDD:206637 16/100 (16%)
Cadherin_repeat 998..1097 CDD:206637 25/109 (23%)
Cadherin_repeat 1105..1202 CDD:206637 33/107 (31%)
Cadherin_repeat 1217..1307 CDD:206637 28/99 (28%)
Cadherin_repeat 1316..1412 CDD:206637 32/104 (31%)
Cadherin_repeat 1423..1521 CDD:206637 31/108 (29%)
Cadherin_repeat 1531..1628 CDD:206637 23/112 (21%)
Cadherin_repeat 1636..1738 CDD:206637 20/121 (17%)
Cadherin_repeat 1750..1845 CDD:206637
Cadherin_repeat 1853..1953 CDD:206637
Cadherin_repeat 1961..2063 CDD:206637
Cadherin_repeat 2071..2167 CDD:206637
Cadherin_repeat 2178..2287 CDD:206637
Cadherin_repeat 2299..2396 CDD:206637
Cadherin_repeat 2404..2502 CDD:206637
Cadherin_repeat 2511..2605 CDD:206637
Cadherin_repeat 2618..2717 CDD:206637
Cadherin_repeat 2733..2840 CDD:206637
Cadherin_repeat 2849..2950 CDD:206637
Blue background indicates that the domain is not in the aligned region.

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