DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and Twist1

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_445982.1 Gene:Twist1 / 85489 RGDID:621455 Length:203 Species:Rattus norvegicus


Alignment Length:199 Identity:51/199 - (25%)
Similarity:82/199 - (41%) Gaps:38/199 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TPAIPQPYSGGTWDAVPLSSPPAGFVGLLDTSSNHSTRSGRTLVEHLNSRATNGVFDP-PLTSTP 116
            :|..|...|....:..|....||        |.....|..|:     :.|:..|...| ..|...
  Rat     8 SPVSPADDSLSNSEEEPDRQQPA--------SGKRGARKRRS-----SRRSAGGSAGPGGATGGG 59

  Fly   117 VKSPEDPNAPRPKRKYAVGKNRV----------------TRSRSPTQVVKIKRFRRMKANDRERN 165
            :...::|.:|...::   ||...                :...||....:::. :|:.||.|||.
  Rat    60 IGGGDEPGSPAQGKR---GKKSAGGGGGAGGGGGGGGSSSGGGSPQSYEELQT-QRVMANVRERQ 120

  Fly   166 RMHNLNDALEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNFTLSG 230
            |..:||:|...||..:|:||.: ||:||:.|:.|..||..|.|||:|.   .||.:......::.
  Rat   121 RTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSD---ELDSKMASCSYVAH 181

  Fly   231 ERIT 234
            ||::
  Rat   182 ERLS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 23/51 (45%)
Twist1NP_445982.1 HLH 110..160 CDD:278439 23/50 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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