DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and TWIST1

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_000465.1 Gene:TWIST1 / 7291 HGNCID:12428 Length:202 Species:Homo sapiens


Alignment Length:175 Identity:50/175 - (28%)
Similarity:76/175 - (43%) Gaps:32/175 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PPAGFVGLLDTSSNHSTRSGRTLVEHLNSRATNGVFDP-PLTSTPVKSPEDPNAP----RPKRKY 132
            ||:|..|      ....||.|        |:..|...| ......|...::|.:|    |.|:..
Human    29 PPSGKRG------GRKRRSSR--------RSAGGGAGPGGAAGGGVGGGDEPGSPAQGKRGKKSA 79

  Fly   133 AV--------GKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPEETK 189
            ..        |....:...||....:::. :|:.||.|||.|..:||:|...||..:|:||.: |
Human    80 GCGGGGGAGGGGGSSSGGGSPQSYEELQT-QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-K 142

  Fly   190 LTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNFTLSGERIT 234
            |:||:.|:.|..||..|.|||:|.   .||.:......::.||::
Human   143 LSKIQTLKLAARYIDFLYQVLQSD---ELDSKMASCSYVAHERLS 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 23/51 (45%)
TWIST1NP_000465.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..105 18/89 (20%)
HLH 109..159 CDD:278439 23/50 (46%)
Sufficient for transactivation activity. /evidence=ECO:0000250 161..191 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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