Protein Alignment tap and Neurod6

DIOPT Version :9

• Sequence 1: NP_524124.1
• Gene: tap / 39935
• FlyBaseID: FBgn0015550
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_001102707.1
• Gene: Neurod6 / 500137
• RGDID: 1562793
• Length: 337
• Species: Rattus norvegicus
• Alignment Length: 268
• Identity: 81/268 - (30%)
• Similarity: 117/268 - (43%)
• Gaps: 50/268 - (18%)

  Fly   118 KSPEDPNAPRPKRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLP 182
            :..||.|. .|:|: .:.|.:.|:.|    :.::| |||.:||.|||||||.|||||:.||..:|
  Rat    65 REEEDENG-LPRRR-GLRKKKTTKLR----LERVK-FRRQEANARERNRMHGLNDALDNLRKVVP 122

  Fly   183 SLPEETKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNFTLSGERITKELFDALFVNPQP 247
            ...:..||:|||.||.|.|||:||.::|..|...:| |..:||......:.|..|.....
  Rat   123 CYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDL-LTFVQNLCKGLSQPTTNLVAGCL----- 181

  Fly   248 YPLFGRMFPYGQGMAPLAQHQTAPAS------HAEQ---PPAMGGFQHG-MDYPQQPPGFDFTGS 302
             .|..|.|..||| ...|.|..:|.|      |:.:   ||.     || :|..:....:::..:
  Rat   182 -QLNARSFLMGQG-GEAAHHTRSPYSTFYPPYHSPELATPPG-----HGTLDNSKSMKPYNYCSA 239

  Fly   303 MR-FYHQQQQQPHQPHH---LQPNPQQESSPQQFSQEKYDLFRGSFDAAANLHSTNLDSGIHQQS 363
            .. ||.....:...|..   |.|.|...:......||:      :.|     :..|.:.|:|
  Rat   240 YESFYESTSPECASPQFEGPLSPPPINYNGIFSLKQEE------TLD-----YGKNYNYGMH--- 290

  Fly   364 SFYSQTPP 371
              |...||
  Rat   291 --YCAVPP 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tap	NP_524124.1	HLH	155..207	CDD:278439	31/51 (61%)
Neurod6	NP_001102707.1	HLH	100..151	CDD:197674	29/50 (58%)
		Neuro_bHLH	153..272	CDD:315246	29/131 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166339088
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3898
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.740