DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and HLH4C

DIOPT Version :10

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster


Alignment Length:104 Identity:38/104 - (36%)
Similarity:52/104 - (50%) Gaps:14/104 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SPEDPNAPRPKRKYA----------VGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDA 173
            :|..|..|.|:|:..          ||.:|..|.|.....:|   :|...|. |||.|:...|.:
  Fly    67 APPPPPTPAPRRRTTPIAHLDPSELVGLSREERRRRRRATLK---YRTAHAT-RERIRVEAFNVS 127

  Fly   174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212
            ..:||..||:||.:.||:|||||:.|..||..|..|||:
  Fly   128 FAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLET 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 bHLH_TS_NGN 155..211 CDD:381434 25/55 (45%)
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 26/63 (41%)

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