Protein Alignment tap and Neurod1

DIOPT Version :9

• Sequence 1: NP_524124.1
• Gene: tap / 39935
• FlyBaseID: FBgn0015550
• Length: 398
• Species: Drosophila melanogaster
• Sequence 2: NP_062091.1
• Gene: Neurod1 / 29458
• RGDID: 3165
• Length: 357
• Species: Rattus norvegicus
• Alignment Length: 325
• Identity: 91/325 - (28%)
• Similarity: 125/325 - (38%)
• Gaps: 75/325 - (23%)

  Fly    57 PQPYSGGTWDAVPLSSPPAGFVGLLDTSSNHSTRSGRTLVEHLNSR---ATNG----VFDPPLTS 114
            |||....:|....|||          ....|........:|.:|:.   ..||    ..|..|..
  Rat    14 PQPQGPPSWTDECLSS----------QDEEHEADKKEDELEAMNAEEDSLRNGGEEEDEDEDLEE 68

  Fly   115 TPVKSPEDPNAPRPKRKYAVGKNRVTRSRSPTQVVKIKRF--RRMKANDRERNRMHNLNDALEKL 177
            .. :..|:.:..:|||: ...|.::|::|       ::||  ||||||.|||||||.||.||:.|
  Rat    69 EE-EEEEEEDDQKPKRR-GPKKKKMTKAR-------LERFKLRRMKANARERNRMHGLNAALDNL 124

  Fly   178 RVTLPSLPEETKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNFTLSG--ERITKELFDA 240
            |..:|...:..||:|||.||.|.|||:||.::|.||.|  .||.........|  :..|..:...
  Rat   125 RKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKS--PDLVSFVQTLCKGLSQPTTNLVAGC 187

  Fly   241 LFVNPQPY------------PLFGRMFP-----YGQGMAPLAQHQTAPAS---HAEQPP-----A 280
            |.:||:.:            |.....||     |.....|...:.|..:|   |.:.||     |
  Rat   188 LQLNPRTFLPEQNPDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVFHVKPPPHAYSAA 252

  Fly   281 MGGF---------QHGMDYPQQPPGFDFTGSMRFYHQQQQQ--------PHQPHHLQPNPQQESS 328
            :..|         ....|.|..|| ....|:..|.|:...:        .|.|......||...|
  Rat   253 LEPFFESPLTDCTSPSFDGPLSPP-LSINGNFSFKHEPSTEFEKNYAFTMHYPAATLAGPQSHGS 316

  Fly   329  328
              Rat   317  316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tap	NP_524124.1	HLH	155..207	CDD:278439	32/51 (63%)
Neurod1	NP_062091.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..94		20/91 (22%)
		bHLH_TS_NeuroD1	75..160	CDD:381562	42/92 (46%)
		Nuclear localization signal. /evidence=ECO:0000255	87..93		1/5 (20%)
		Neuro_bHLH	160..284	CDD:403655	26/126 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166339122
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3898
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.740