DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and Id1

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:XP_006235329.1 Gene:Id1 / 25261 RGDID:2858 Length:154 Species:Rattus norvegicus


Alignment Length:75 Identity:21/75 - (28%)
Similarity:40/75 - (53%) Gaps:15/75 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 MHNLNDALEKLRVTLPSLPEETKLTKIEILRFAHNYIFALE-------QVLESGG---SINLDLE 221
            ::::|....:|:..:|:||:..|::|:|||:...:||..|:       :|..:||   .:...|.
  Rat    59 LYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVATAGGRGLPVRAPLS 123

  Fly   222 KLQNFTLSGE 231
                 ||:||
  Rat   124 -----TLNGE 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 12/39 (31%)
Id1XP_006235329.1 bHLH_dnHLH_ID1 55..106 CDD:381534 13/46 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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