DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and hlh-8

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_509367.1 Gene:hlh-8 / 181069 WormBaseID:WBGene00001953 Length:178 Species:Caenorhabditis elegans


Alignment Length:212 Identity:56/212 - (26%)
Similarity:79/212 - (37%) Gaps:63/212 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 RPKRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPEETKLT 191
            |.|.:..|.||.|...:           :|..||.|||.|...||||...||..:||:|.: |::
 Worm     4 RRKGERVVRKNEVENVQ-----------QRACANRRERQRTKELNDAFTLLRKLIPSMPSD-KMS 56

  Fly   192 KIEILRFAHNYIFALEQVLESGGSINLDLEKLQNFTLSGERITKELFDALFVNPQPYPLFGRMFP 256
            ||..||.|.:||..|:::.::|.       ||...::..|:....|..|.           .|:.
 Worm    57 KIHTLRIATDYISFLDEMQKNGC-------KLYGHSIFDEKRGYNLQSAF-----------NMWR 103

  Fly   257 YGQGMAPLA-QHQTAPASHAEQPPAMGGFQHGMDYPQQPPGFDFTGSMRFYHQQQQQPHQPHHLQ 320
            ...|..|:| ..|..|...|..||..         |...|                    ||.|.
 Worm   104 GNNGYTPIAGPSQLPPLQSAHIPPPA---------PSSIP--------------------PHCLM 139

  Fly   321 PNPQQESSP---QQFSQ 334
            |.|..::.|   |:|.:
 Worm   140 PQPWYQTCPPPKQEFHE 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 24/51 (47%)
hlh-8NP_509367.1 HLH 21..71 CDD:278439 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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