DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and neurod2

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_571157.1 Gene:neurod2 / 114435 ZFINID:ZDB-GENE-010608-3 Length:363 Species:Danio rerio


Alignment Length:316 Identity:79/316 - (25%)
Similarity:130/316 - (41%) Gaps:86/316 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 EDPNAPRPKRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLP 185
            |:.:..|||::   |..:  |..:|.::.:.| .||.|||.|||.|||:||.||:.|...:|...
Zfish    80 EEGDGDRPKKR---GPKK--RKMTPARLERSK-VRRQKANARERTRMHDLNSALDNLLKVVPCYS 138

  Fly   186 EETKLTKIEILRFAHNYIFALEQVLESG-------------------------GSINLDLEKLQN 225
            :..||:|||.||.|.|||:||.::|.:|                         |.:.|:   .:|
Zfish   139 KTQKLSKIETLRLAKNYIWALSEILRNGKRPDVVSYVQTLCKGLSQPTTNLVAGCLQLN---SRN 200

  Fly   226 FTLSGERITKELFDALFVNPQPYPLFG-RMFPYGQGMAPLAQHQTAPASHAEQPPAMGGFQHGMD 289
            |      :|::..:.:..: .|.|.|. :.:||..........|:..::|:.:..::......:.
Zfish   201 F------LTEQCQEGVRFH-TPTPSFSIQSYPYQCSRLSSTNCQSGSSTHSLRNHSLCSAYEALY 258

  Fly   290 YPQQPPGF---DFTGSMRFYH-----------QQQQQPHQPHHLQPNPQQESSPQQFSQEKYDLF 340
            .....|.:   ||.|    :|           .:|::|     |.|:.::   ..|:|.. |...
Zfish   259 TEGTSPEYISADFEG----HHGPPVCVNGNFGVRQEEP-----LSPDAER---GYQYSMH-YTNL 310

  Fly   341 RGSFDAAA-------------NLHSTNLDSGIHQQSSFYSQTPPWKDYPEDQAHVH 383
            .||..:||             ::||.||.. .|.....:.:||.   |.|..|..|
Zfish   311 HGSRSSAAHGITCGPPGARSGSVHSENLPL-FHDVHMHHDRTPA---YEELNAFFH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 29/51 (57%)
neurod2NP_571157.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..116 13/41 (32%)
Nuclear localization signal. /evidence=ECO:0000255 93..99 1/7 (14%)
HLH 105..164 CDD:238036 31/59 (53%)
Neuro_bHLH 166..285 CDD:289310 18/132 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578705
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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