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Protein Alignment tap and neurog3
DIOPT Version :9
Sequence 1: | NP_524124.1 |
Gene: | tap / 39935 |
FlyBaseID: | FBgn0015550 |
Length: | 398 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571890.1 |
Gene: | neurog3 / 114411 |
ZFINID: | ZDB-GENE-010608-4 |
Length: | 208 |
Species: | Danio rerio |
Alignment Length: | 144 |
Identity: | 51/144 - (35%) |
Similarity: | 70/144 - (48%) |
Gaps: | 36/144 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 90 RSGRTLVEHLNSRATNGVF--------DPPLTST------PVKSPEDPNAPRPKRKYAVGKNRVT 140
||...|| ..||.| :|...|| |:|...:......:..:...:::.:
Zfish 4 RSSCALV------GRNGTFKSNWSSASEPKFGSTDMTKSQPIKYNREAELASKEWSFTFREDKTS 62
Fly 141 RSRSPTQVVKIKRF---------RRMKANDRERNRMHNLNDALEKLRVTLPSLPEETKLTKIEIL 196
.. |:|:. ||:|||||.|:||||||.||:.||..||:.|::.||||||.|
Zfish 63 NG-------KLKKLMSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLPTFPDDAKLTKIETL 120
Fly 197 RFAHNYIFALEQVL 210
|||.|||:||.:.|
Zfish 121 RFARNYIWALSETL 134
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tap | NP_524124.1 |
HLH |
155..207 |
CDD:278439 |
35/51 (69%) |
neurog3 | NP_571890.1 |
HLH |
84..135 |
CDD:197674 |
33/51 (65%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578710 |
Domainoid |
1 |
1.000 |
86 |
1.000 |
Domainoid score |
I8049 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002069 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26618 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4181 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1366 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
10 | 9.830 |
|
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