DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tap and neurog3

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_571890.1 Gene:neurog3 / 114411 ZFINID:ZDB-GENE-010608-4 Length:208 Species:Danio rerio


Alignment Length:144 Identity:51/144 - (35%)
Similarity:70/144 - (48%) Gaps:36/144 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RSGRTLVEHLNSRATNGVF--------DPPLTST------PVKSPEDPNAPRPKRKYAVGKNRVT 140
            ||...||      ..||.|        :|...||      |:|...:......:..:...:::.:
Zfish     4 RSSCALV------GRNGTFKSNWSSASEPKFGSTDMTKSQPIKYNREAELASKEWSFTFREDKTS 62

  Fly   141 RSRSPTQVVKIKRF---------RRMKANDRERNRMHNLNDALEKLRVTLPSLPEETKLTKIEIL 196
            ..       |:|:.         ||:|||||.|:||||||.||:.||..||:.|::.||||||.|
Zfish    63 NG-------KLKKLMSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLPTFPDDAKLTKIETL 120

  Fly   197 RFAHNYIFALEQVL 210
            |||.|||:||.:.|
Zfish   121 RFARNYIWALSETL 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 35/51 (69%)
neurog3NP_571890.1 HLH 84..135 CDD:197674 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578710
Domainoid 1 1.000 86 1.000 Domainoid score I8049
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002069
OrthoInspector 1 1.000 - - otm26618
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19290
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4181
SonicParanoid 1 1.000 - - X1366
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.830

Return to query results.
Submit another query.