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Protein Alignment tap and atoh1c
DIOPT Version :9
Sequence 1: | NP_524124.1 |
Gene: | tap / 39935 |
FlyBaseID: | FBgn0015550 |
Length: | 398 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003199618.1 |
Gene: | atoh1c / 100498672 |
ZFINID: | ZDB-GENE-090805-1 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 181 |
Identity: | 51/181 - (28%) |
Similarity: | 75/181 - (41%) |
Gaps: | 40/181 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 VPLSSPPAGFVGLLDTSSNHSTRSGRTLV----EHLNSRATNGVFDP------PLTSTPVKSPED 122
:|....|.|.....:|..:||.:..:..: |.|..||: .|| .||.....|.|.
Zfish 1 MPHPDTPFGQFIWRETDRSHSEQCPKAPMGWREEQLQDRAS---CDPCALVQLRLTGLSYSSEEQ 62
Fly 123 PNAPRPKRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPEE 187
.:..|.:|: ||:.||.|||.||..||.|.::||..:|::..:
Zfish 63 SSIARARRR-----------------------RRLAANARERRRMLGLNVAFDRLRSVIPNVESD 104
Fly 188 TKLTKIEILRFAHNYIFALEQVLESGGSINLDLE-KLQNFTLSGERITKEL 237
.||:|.|.|:.|..||..|.::||.. :.|.| .....|:..:.|||.|
Zfish 105 RKLSKSETLQMAQIYISTLSELLEDK---DCDPETPYPTLTMQDQDITKGL 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tap | NP_524124.1 |
HLH |
155..207 |
CDD:278439 |
23/51 (45%) |
atoh1c | XP_003199618.1 |
HLH |
87..129 |
CDD:197674 |
16/41 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578707 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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