DRSC/TRiP Functional Genomics Resources

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Protein Alignment tap and scxa

DIOPT Version :9

Sequence 1:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001076538.2 Gene:scxa / 100034489 ZFINID:ZDB-GENE-060503-414 Length:204 Species:Danio rerio


Alignment Length:139 Identity:44/139 - (31%)
Similarity:62/139 - (44%) Gaps:37/139 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KRKYAVGKNRVTRSRSPT-------QVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPE 186
            |||.:||........:||       .|.:|:  :|..||.|||:|.:::|.|...||..:|:.|.
Zfish    54 KRKSSVGGGGRLIGVTPTIPTGTIGHVPEIR--QRNAANARERDRTNSVNTAFTALRTLIPTEPA 116

  Fly   187 ETKLTKIEILRFAHNYIFALEQVL------------ESGG----------------SINLDLEKL 223
            :.||:|||.||.|.:||..|..||            .|||                |.|...:::
Zfish   117 DRKLSKIETLRLASSYISHLGNVLLVGEACGDGQPCHSGGPSTSNYYHHHGSPSRDSENSQPKQI 181

  Fly   224 QNFTLSGER 232
            ..|.||.:|
Zfish   182 CTFCLSNQR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapNP_524124.1 HLH 155..207 CDD:278439 23/51 (45%)
scxaNP_001076538.2 HLH 85..136 CDD:278439 23/50 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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