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Protein Alignment tap and scxa
DIOPT Version :9
Sequence 1: | NP_524124.1 |
Gene: | tap / 39935 |
FlyBaseID: | FBgn0015550 |
Length: | 398 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001076538.2 |
Gene: | scxa / 100034489 |
ZFINID: | ZDB-GENE-060503-414 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 139 |
Identity: | 44/139 - (31%) |
Similarity: | 62/139 - (44%) |
Gaps: | 37/139 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 129 KRKYAVGKNRVTRSRSPT-------QVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPE 186
|||.:||........:|| .|.:|: :|..||.|||:|.:::|.|...||..:|:.|.
Zfish 54 KRKSSVGGGGRLIGVTPTIPTGTIGHVPEIR--QRNAANARERDRTNSVNTAFTALRTLIPTEPA 116
Fly 187 ETKLTKIEILRFAHNYIFALEQVL------------ESGG----------------SINLDLEKL 223
:.||:|||.||.|.:||..|..|| .||| |.|...:::
Zfish 117 DRKLSKIETLRLASSYISHLGNVLLVGEACGDGQPCHSGGPSTSNYYHHHGSPSRDSENSQPKQI 181
Fly 224 QNFTLSGER 232
..|.||.:|
Zfish 182 CTFCLSNQR 190
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tap | NP_524124.1 |
HLH |
155..207 |
CDD:278439 |
23/51 (45%) |
scxa | NP_001076538.2 |
HLH |
85..136 |
CDD:278439 |
23/50 (46%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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