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Protein Alignment tap and olig1
DIOPT Version :9
Sequence 1: | NP_524124.1 |
Gene: | tap / 39935 |
FlyBaseID: | FBgn0015550 |
Length: | 398 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001018632.1 |
Gene: | olig1 / 100001484 |
ZFINID: | ZDB-GENE-050107-2 |
Length: | 235 |
Species: | Danio rerio |
Alignment Length: | 184 |
Identity: | 45/184 - (24%) |
Similarity: | 64/184 - (34%) |
Gaps: | 52/184 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 141 RSRSPTQVVKIKRFR--RMKANDRERNRMHNLNDALEKLRVTL--------------------PS 183
||..|.:.:..:..: |.|.|.|||.||.:||.|::.||..: |.
Zfish 45 RSSKPPRELSSEEQQELRRKINSRERKRMQDLNVAMDALREVMVPYSSSPTGVGGALQHPYFPPG 109
Fly 184 LPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNFTLSGERITKELFDALFVNPQP 247
.|.. .:|:||..|..|.|||..| ||...::.:|......|..::..:...|.....|
Zfish 110 APTTGRRLSKISTLVLARNYILLL-------GSSLQEMRRLLGEVSIGMGVSGTVPRLLLTGGWP 167
Fly 248 YPLFG------------------RMFPYGQGMAPLAQHQTAPASHAEQPPAMGG 283
: |.| .:.|.|....||| ..|.|.:|.|....|
Zfish 168 F-LTGPGQLLLSPPEQQLGVAKCPLLPQGAQEEPLA---WGPGSMSESPVCQCG 217
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tap | NP_524124.1 |
HLH |
155..207 |
CDD:278439 |
23/74 (31%) |
olig1 | NP_001018632.1 |
HLH domain |
62..139 |
|
26/83 (31%) |
HLH |
62..133 |
CDD:278439 |
23/70 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578703 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.840 |
|
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